BLASTX nr result

ID: Coptis23_contig00040961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040961
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526157.1| glycogenin, putative [Ricinus communis] gi|2...   295   3e-78
ref|XP_002275240.1| PREDICTED: uncharacterized protein LOC100248...   295   5e-78
ref|XP_002278157.2| PREDICTED: uncharacterized protein LOC100245...   293   1e-77
emb|CBI19971.3| unnamed protein product [Vitis vinifera]              293   1e-77
ref|XP_003602583.1| Secondary cell wall-related glycosyltransfer...   292   3e-77

>ref|XP_002526157.1| glycogenin, putative [Ricinus communis] gi|223534534|gb|EEF36233.1|
           glycogenin, putative [Ricinus communis]
          Length = 656

 Score =  295 bits (756), Expect = 3e-78
 Identities = 126/157 (80%), Positives = 143/157 (91%)
 Frame = -2

Query: 592 RIPKHMNFLKHFWIGDEEEKKAMKTRLFGSEPPVLYVLHYLGLKPWLCFRDYDCNWNVDI 413
           RIPKHMNFLKHFW GDEEEKK MKTRLFG++PP+LYV+HYLG KPWLCFRDYDCNWNVDI
Sbjct: 487 RIPKHMNFLKHFWEGDEEEKKQMKTRLFGADPPILYVIHYLGYKPWLCFRDYDCNWNVDI 546

Query: 412 LREFASDVAHKRWWKVHDAMPEHLQKFCLIRTKQKAGLEWNRRQAEKANYTDGHWRITIK 233
           L+EFASDVAHK WWKVHDAMPE+LQK+CL+R+KQKA LEW+RRQAEKANYTDGHW+I I+
Sbjct: 547 LQEFASDVAHKTWWKVHDAMPENLQKYCLLRSKQKAALEWDRRQAEKANYTDGHWKIKIQ 606

Query: 232 DKRLKTCSEELCNWKSMLSHWGETNWTDDDTFVPTNP 122
           DKRL+TC E+ C W+SML HWGETNWTD+ T  P+ P
Sbjct: 607 DKRLETCFEDFCFWESMLWHWGETNWTDNATVTPSPP 643


>ref|XP_002275240.1| PREDICTED: uncharacterized protein LOC100248912 [Vitis vinifera]
          Length = 636

 Score =  295 bits (754), Expect = 5e-78
 Identities = 124/159 (77%), Positives = 140/159 (88%)
 Frame = -2

Query: 592 RIPKHMNFLKHFWIGDEEEKKAMKTRLFGSEPPVLYVLHYLGLKPWLCFRDYDCNWNVDI 413
           RIP+HMNFLKHFWIGDEEEKK MKT LFG+EPP+LYVLHYLGLKPWLC+RDYDCNWN DI
Sbjct: 471 RIPRHMNFLKHFWIGDEEEKKQMKTHLFGAEPPILYVLHYLGLKPWLCYRDYDCNWNSDI 530

Query: 412 LREFASDVAHKRWWKVHDAMPEHLQKFCLIRTKQKAGLEWNRRQAEKANYTDGHWRITIK 233
            +EFASDVAH RWW+VHDAMPE LQ+FC++ +KQKAGLEW+RRQAEKANY+DGHWRI I 
Sbjct: 531 FQEFASDVAHTRWWRVHDAMPEQLQQFCMLGSKQKAGLEWDRRQAEKANYSDGHWRIKIN 590

Query: 232 DKRLKTCSEELCNWKSMLSHWGETNWTDDDTFVPTNPVI 116
           D+RL  C + LC+WK ML HWGETNWTDD+ F PT P I
Sbjct: 591 DRRLHKCIDNLCSWKGMLRHWGETNWTDDEIFTPTPPAI 629


>ref|XP_002278157.2| PREDICTED: uncharacterized protein LOC100245489 [Vitis vinifera]
          Length = 637

 Score =  293 bits (751), Expect = 1e-77
 Identities = 130/165 (78%), Positives = 144/165 (87%), Gaps = 2/165 (1%)
 Frame = -2

Query: 592 RIPKHMNFLKHFWIGDEEEKKAMKTRLFGSEPPVLYVLHYLGLKPWLCFRDYDCNWNVDI 413
           RIPKHMNFLKHFW GDEEEKK MKTRLFG++PPVLYVLHYLGLKPWLCFRDYDCNWNVDI
Sbjct: 471 RIPKHMNFLKHFWEGDEEEKKEMKTRLFGADPPVLYVLHYLGLKPWLCFRDYDCNWNVDI 530

Query: 412 LREFASDVAHKRWWKVHDAMPEHLQKFCLIRTKQKAGLEWNRRQAEKANYTDGHWRITIK 233
           L+EFAS+VAHKRWWK+HDAMPE+LQKFCL+R+KQKA LEW+RRQAEK NYTDGHW+I IK
Sbjct: 531 LQEFASNVAHKRWWKIHDAMPENLQKFCLLRSKQKAALEWDRRQAEKGNYTDGHWKIKIK 590

Query: 232 DKRLKTCSEELCNWKSMLSHWGETNWTDD--DTFVPTNPVIASKP 104
           D RL+TC E+ C W+SML HWGETNWTD+   T  P     AS P
Sbjct: 591 DPRLQTCFEDFCFWESMLWHWGETNWTDNATATLPPPTTTTASLP 635


>emb|CBI19971.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score =  293 bits (751), Expect = 1e-77
 Identities = 130/165 (78%), Positives = 144/165 (87%), Gaps = 2/165 (1%)
 Frame = -2

Query: 592 RIPKHMNFLKHFWIGDEEEKKAMKTRLFGSEPPVLYVLHYLGLKPWLCFRDYDCNWNVDI 413
           RIPKHMNFLKHFW GDEEEKK MKTRLFG++PPVLYVLHYLGLKPWLCFRDYDCNWNVDI
Sbjct: 392 RIPKHMNFLKHFWEGDEEEKKEMKTRLFGADPPVLYVLHYLGLKPWLCFRDYDCNWNVDI 451

Query: 412 LREFASDVAHKRWWKVHDAMPEHLQKFCLIRTKQKAGLEWNRRQAEKANYTDGHWRITIK 233
           L+EFAS+VAHKRWWK+HDAMPE+LQKFCL+R+KQKA LEW+RRQAEK NYTDGHW+I IK
Sbjct: 452 LQEFASNVAHKRWWKIHDAMPENLQKFCLLRSKQKAALEWDRRQAEKGNYTDGHWKIKIK 511

Query: 232 DKRLKTCSEELCNWKSMLSHWGETNWTDD--DTFVPTNPVIASKP 104
           D RL+TC E+ C W+SML HWGETNWTD+   T  P     AS P
Sbjct: 512 DPRLQTCFEDFCFWESMLWHWGETNWTDNATATLPPPTTTTASLP 556


>ref|XP_003602583.1| Secondary cell wall-related glycosyltransferase family [Medicago
           truncatula] gi|355491631|gb|AES72834.1| Secondary cell
           wall-related glycosyltransferase family [Medicago
           truncatula]
          Length = 637

 Score =  292 bits (747), Expect = 3e-77
 Identities = 122/159 (76%), Positives = 141/159 (88%)
 Frame = -2

Query: 592 RIPKHMNFLKHFWIGDEEEKKAMKTRLFGSEPPVLYVLHYLGLKPWLCFRDYDCNWNVDI 413
           RIP+HMNFLKHFW+GDEEEKK MKT LFG+EPP+LYVLHYLGLKPWLCFRDYDCNWN DI
Sbjct: 471 RIPRHMNFLKHFWVGDEEEKKQMKTMLFGAEPPILYVLHYLGLKPWLCFRDYDCNWNADI 530

Query: 412 LREFASDVAHKRWWKVHDAMPEHLQKFCLIRTKQKAGLEWNRRQAEKANYTDGHWRITIK 233
             EFASDVAH +WWKVHDAMP+ LQ+FCL+++KQKA LEW+R QAE ANYTDGHWRI +K
Sbjct: 531 FHEFASDVAHAKWWKVHDAMPKLLQQFCLLQSKQKAQLEWDRSQAEIANYTDGHWRIKVK 590

Query: 232 DKRLKTCSEELCNWKSMLSHWGETNWTDDDTFVPTNPVI 116
           D+RLK C + LC+WKSML HWGE+NWTDD++F PT P +
Sbjct: 591 DRRLKKCIDNLCDWKSMLRHWGESNWTDDESFTPTPPTV 629


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