BLASTX nr result

ID: Coptis23_contig00040960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040960
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279446.1| PREDICTED: major facilitator superfamily dom...    79   3e-13
ref|XP_003597112.1| Major facilitator superfamily domain-contain...    70   2e-10
ref|XP_004141884.1| PREDICTED: major facilitator superfamily dom...    69   5e-10
ref|XP_002533163.1| conserved hypothetical protein [Ricinus comm...    69   5e-10
ref|XP_002878658.1| hypothetical protein ARALYDRAFT_481182 [Arab...    67   1e-09

>ref|XP_002279446.1| PREDICTED: major facilitator superfamily domain-containing protein
           5 [Vitis vinifera] gi|296087347|emb|CBI33721.3| unnamed
           protein product [Vitis vinifera]
          Length = 448

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 50/105 (47%), Positives = 55/105 (52%)
 Frame = +3

Query: 3   VIESDVWELKPQXXXXXXXXXXXXXXXXPYFXXXXXXXXXXXYPDLGGIVSNSPSLSSFL 182
           VIES VWE KP                 P F                     SPS   FL
Sbjct: 4   VIESSVWEPKPSLYIFIFLASFLSIFLLPNFSNRTLAPFDH---------GTSPS---FL 51

Query: 183 RFQTSFLLIYSLASVNEGIQAVFGEFEYAYYGVSREQMLVYLCVG 317
           RFQ +FLLI+SLAS  EG+ +VFGEFE AYYGVSREQM+V LCVG
Sbjct: 52  RFQRNFLLIFSLASGMEGVSSVFGEFELAYYGVSREQMVVSLCVG 96


>ref|XP_003597112.1| Major facilitator superfamily domain-containing protein [Medicago
           truncatula] gi|357482681|ref|XP_003611627.1| Major
           facilitator superfamily domain-containing protein
           [Medicago truncatula] gi|355486160|gb|AES67363.1| Major
           facilitator superfamily domain-containing protein
           [Medicago truncatula] gi|355512962|gb|AES94585.1| Major
           facilitator superfamily domain-containing protein
           [Medicago truncatula]
          Length = 447

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 45/113 (39%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
 Frame = +3

Query: 3   VIESDVWELKPQXXXXXXXXXXXXXXXXPYFXXXXXXXXXXXYPDLGGIVS---NSPSLS 173
           VIES +WEL P                   F           YP      S   +    S
Sbjct: 4   VIESSIWELNPSIF---------------IFIFVCCIFSIFLYPHASNRTSTIFDHGISS 48

Query: 174 SFLRFQTSFLLIYSLASVNEGIQAVFGEFEYAYYGVSREQMLVYLCVGSASAV 332
           SFLRFQ +FL+IYSLASV EG+ +VFGEFE A +G  RE+M++ LC G  +A+
Sbjct: 49  SFLRFQRNFLVIYSLASVVEGLWSVFGEFELASHGFDREKMIMSLCYGYTTAL 101


>ref|XP_004141884.1| PREDICTED: major facilitator superfamily domain-containing protein
           5-like [Cucumis sativus]
           gi|449511005|ref|XP_004163836.1| PREDICTED: major
           facilitator superfamily domain-containing protein 5-like
           [Cucumis sativus]
          Length = 452

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/54 (59%), Positives = 44/54 (81%)
 Frame = +3

Query: 171 SSFLRFQTSFLLIYSLASVNEGIQAVFGEFEYAYYGVSREQMLVYLCVGSASAV 332
           S+F  FQ  FLL+YSLASV EG+ +V+GEFE+ Y GVSREQ+++ LCVG A+++
Sbjct: 52  SAFSTFQRKFLLLYSLASVMEGLWSVYGEFEFTYRGVSREQIVLSLCVGYAASL 105


>ref|XP_002533163.1| conserved hypothetical protein [Ricinus communis]
           gi|223527035|gb|EEF29222.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 424

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/53 (60%), Positives = 41/53 (77%)
 Frame = +3

Query: 174 SFLRFQTSFLLIYSLASVNEGIQAVFGEFEYAYYGVSREQMLVYLCVGSASAV 332
           SFLRFQ+ FL ++SLASV EG+ +VFGEFE   YGVS+ Q + YLCVG  +A+
Sbjct: 53  SFLRFQSKFLFLFSLASVMEGLWSVFGEFELVLYGVSKVQTVTYLCVGFGAAL 105


>ref|XP_002878658.1| hypothetical protein ARALYDRAFT_481182 [Arabidopsis lyrata subsp.
           lyrata] gi|297324497|gb|EFH54917.1| hypothetical protein
           ARALYDRAFT_481182 [Arabidopsis lyrata subsp. lyrata]
          Length = 449

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 32/55 (58%), Positives = 43/55 (78%)
 Frame = +3

Query: 171 SSFLRFQTSFLLIYSLASVNEGIQAVFGEFEYAYYGVSREQMLVYLCVGSASAVL 335
           SSF RFQ  FL IY+L+SV EG+ +V+GE E A YGVS+E M+ YLCVG ++A++
Sbjct: 49  SSFARFQRWFLAIYTLSSVMEGLWSVYGELELASYGVSKESMVFYLCVGYSTALV 103


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