BLASTX nr result

ID: Coptis23_contig00040945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040945
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF35949.1| hypothetical protein [Coptis japonica]                147   7e-34
ref|XP_003623947.1| Trypsin inhibitor [Medicago truncatula] gi|3...    99   3e-19
gb|AFK40073.1| unknown [Lotus japonicus]                               96   3e-18
gb|AAQ10729.1| trypsin inhibitor [Medicago scutellata]                 96   3e-18
ref|XP_003623935.1| Bowman-Birk type proteinase inhibitor [Medic...    96   3e-18

>dbj|BAF35949.1| hypothetical protein [Coptis japonica]
          Length = 98

 Score =  147 bits (372), Expect = 7e-34
 Identities = 65/74 (87%), Positives = 67/74 (90%), Gaps = 1/74 (1%)
 Frame = +1

Query: 106 EVAARGSNTSCCNQCVCTKSIPPQCRCLDVKEYCYSSCTRCLCTRSIPPQCRCIDVK-DK 282
           EVAARGSNTSCCNQC+CTKSIPPQCRC DVKEYC+SSCT CLCTRSIPPQCRC DVK D 
Sbjct: 21  EVAARGSNTSCCNQCLCTKSIPPQCRCTDVKEYCHSSCTNCLCTRSIPPQCRCTDVKLDN 80

Query: 283 CVPPSCLKMDIEQV 324
           C PPSC KMDIEQV
Sbjct: 81  CAPPSCRKMDIEQV 94


>ref|XP_003623947.1| Trypsin inhibitor [Medicago truncatula] gi|355498962|gb|AES80165.1|
           Trypsin inhibitor [Medicago truncatula]
           gi|388499582|gb|AFK37857.1| unknown [Medicago
           truncatula]
          Length = 120

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 41/69 (59%), Positives = 48/69 (69%)
 Frame = +1

Query: 88  HGEPVKEVAARGSNTSCCNQCVCTKSIPPQCRCLDVKEYCYSSCTRCLCTRSIPPQCRCI 267
           +GE   EV  + + T+CCN C CTKSIPPQC C D+ E C+S+C RCLCTRS PPQCRC 
Sbjct: 44  NGEATYEV--KSTTTACCNSCPCTKSIPPQCHCADIGEKCHSACKRCLCTRSFPPQCRCT 101

Query: 268 DVKDKCVPP 294
           D  D C  P
Sbjct: 102 DTTDFCYEP 110


>gb|AFK40073.1| unknown [Lotus japonicus]
          Length = 119

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 35/59 (59%), Positives = 46/59 (77%)
 Frame = +1

Query: 118 RGSNTSCCNQCVCTKSIPPQCRCLDVKEYCYSSCTRCLCTRSIPPQCRCIDVKDKCVPP 294
           + + T+CCN C CT+SIPPQCRC D+ E C+S+C  C+CTRSIPPQCRC+D+ + C  P
Sbjct: 53  KSTATACCNSCPCTRSIPPQCRCTDIGETCHSACKACICTRSIPPQCRCLDITNFCYDP 111



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 19/30 (63%), Positives = 23/30 (76%)
 Frame = +1

Query: 133 SCCNQCVCTKSIPPQCRCLDVKEYCYSSCT 222
           S C  C+CT+SIPPQCRCLD+  +CY  CT
Sbjct: 84  SACKACICTRSIPPQCRCLDITNFCYDPCT 113


>gb|AAQ10729.1| trypsin inhibitor [Medicago scutellata]
          Length = 110

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 38/65 (58%), Positives = 48/65 (73%)
 Frame = +1

Query: 106 EVAARGSNTSCCNQCVCTKSIPPQCRCLDVKEYCYSSCTRCLCTRSIPPQCRCIDVKDKC 285
           E   + + T+CC+ C CT+SIPPQC+C DV+E C+S+C  CLCTRS PPQCRC D+ D C
Sbjct: 46  EANTKSTTTACCDFCPCTRSIPPQCQCTDVREKCHSACKSCLCTRSFPPQCRCYDITDFC 105

Query: 286 VPPSC 300
             PSC
Sbjct: 106 Y-PSC 109


>ref|XP_003623935.1| Bowman-Birk type proteinase inhibitor [Medicago truncatula]
           gi|355498950|gb|AES80153.1| Bowman-Birk type proteinase
           inhibitor [Medicago truncatula]
          Length = 242

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/97 (45%), Positives = 62/97 (63%)
 Frame = +1

Query: 106 EVAARGSNTSCCNQCVCTKSIPPQCRCLDVKEYCYSSCTRCLCTRSIPPQCRCIDVKDKC 285
           E   + + T+CC+ C CT+SIPPQC+C DVKE C+S+C  CLCTRS PPQCRC D+ + C
Sbjct: 46  EANTKSTTTACCDFCPCTRSIPPQCQCTDVKEKCHSACKSCLCTRSFPPQCRCYDITNFC 105

Query: 286 VPPSCLKMDIEQVVGY*AESWELSRTLINKSK*IMFL 396
             PSC     +++     E   ++  L+NK+K  M +
Sbjct: 106 Y-PSCTMSPHKEIKERYKEI--VTMELMNKNKKAMVM 139



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
 Frame = +1

Query: 115 ARGSNTSCCNQCVCTKSIPP---QCRCLDVKEYCYSSCTRCLCTRSIPPQCRCIDVKDKC 285
           A+ + T+CCN C+C  S+ P   QCRC DV + C+S+C  C C  S  P C C D+ D C
Sbjct: 181 AKSTATACCNTCLC--SVTPELTQCRCADVGKTCHSACKNCECGWS-SPLCTCYDITDFC 237

Query: 286 VPP 294
             P
Sbjct: 238 YKP 240


Top