BLASTX nr result

ID: Coptis23_contig00040934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040934
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283817.1| PREDICTED: deoxycytidylate deaminase [Vitis ...   244   8e-64
ref|XP_004145155.1| PREDICTED: deoxycytidylate deaminase-like [C...   244   1e-63
ref|XP_002511183.1| deoxycytidylate deaminase, putative [Ricinus...   239   3e-62
ref|XP_003608816.1| Deoxycytidylate deaminase [Medicago truncatu...   239   2e-61
gb|ABK28591.1| unknown [Arabidopsis thaliana]                         236   4e-61

>ref|XP_002283817.1| PREDICTED: deoxycytidylate deaminase [Vitis vinifera]
           gi|297734422|emb|CBI15669.3| unnamed protein product
           [Vitis vinifera]
          Length = 229

 Score =  244 bits (623), Expect(2) = 8e-64
 Identities = 116/130 (89%), Positives = 121/130 (93%)
 Frame = +1

Query: 94  VETSQTPPRACPFDPSKREGCLSWDDYFMAIAFLSAERSKDPNRQVGACLVSENGVILGI 273
           V +++T     PFDPSKR G LSWDDYFMAIAFLSAERSKDPNRQVGACLVS+NGVILGI
Sbjct: 48  VVSTKTAHSQSPFDPSKRRGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGI 107

Query: 274 GYNGFPRGCSDDKLPWAKKSKTGNTLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFP 453
           GYNGFPRGCSDDKLPWAKKSKTG+ LETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFP
Sbjct: 108 GYNGFPRGCSDDKLPWAKKSKTGDPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFP 167

Query: 454 CNECAKIIIQ 483
           CNECAKIIIQ
Sbjct: 168 CNECAKIIIQ 177



 Score = 25.0 bits (53), Expect(2) = 8e-64
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = +3

Query: 480 TGVTEVIYFVEKQ 518
           +GV+EVIYFVEK+
Sbjct: 178 SGVSEVIYFVEKR 190


>ref|XP_004145155.1| PREDICTED: deoxycytidylate deaminase-like [Cucumis sativus]
           gi|449474257|ref|XP_004154120.1| PREDICTED:
           deoxycytidylate deaminase-like [Cucumis sativus]
           gi|449503680|ref|XP_004162123.1| PREDICTED:
           deoxycytidylate deaminase-like [Cucumis sativus]
          Length = 226

 Score =  244 bits (622), Expect(2) = 1e-63
 Identities = 113/120 (94%), Positives = 117/120 (97%)
 Frame = +1

Query: 124 CPFDPSKREGCLSWDDYFMAIAFLSAERSKDPNRQVGACLVSENGVILGIGYNGFPRGCS 303
           CPFDPSKREG LSWDDYFMAIAFLSAERSKDPNRQVGACLVS+NGVILGIGYNGFPRGCS
Sbjct: 53  CPFDPSKREGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCS 112

Query: 304 DDKLPWAKKSKTGNTLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQ 483
           DD+LPWAKKSKT N LETKYPYVCHAEVNAILNTNHASA+GQ+LYVTMFPCNECAKIIIQ
Sbjct: 113 DDQLPWAKKSKTNNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQ 172



 Score = 25.0 bits (53), Expect(2) = 1e-63
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = +3

Query: 480 TGVTEVIYFVEKQ 518
           +GV+EVIYFVEK+
Sbjct: 173 SGVSEVIYFVEKR 185


>ref|XP_002511183.1| deoxycytidylate deaminase, putative [Ricinus communis]
           gi|223550298|gb|EEF51785.1| deoxycytidylate deaminase,
           putative [Ricinus communis]
          Length = 224

 Score =  239 bits (611), Expect(2) = 3e-62
 Identities = 112/119 (94%), Positives = 116/119 (97%)
 Frame = +1

Query: 127 PFDPSKREGCLSWDDYFMAIAFLSAERSKDPNRQVGACLVSENGVILGIGYNGFPRGCSD 306
           PFDP+KR+  LSWDDYFMAIAFLSAERSKDPNRQVGACLVS+NGVILGIGYNGFPRGCSD
Sbjct: 52  PFDPAKRKEYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSD 111

Query: 307 DKLPWAKKSKTGNTLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQ 483
           DKLPWAKKSKTGN LETKYPYVCHAEVNAILNTNHASAAGQ+LYVTMFPCNECAKIIIQ
Sbjct: 112 DKLPWAKKSKTGNPLETKYPYVCHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIIIQ 170



 Score = 24.6 bits (52), Expect(2) = 3e-62
 Identities = 10/12 (83%), Positives = 12/12 (100%)
 Frame = +3

Query: 480 TGVTEVIYFVEK 515
           +GV+EVIYFVEK
Sbjct: 171 SGVSEVIYFVEK 182


>ref|XP_003608816.1| Deoxycytidylate deaminase [Medicago truncatula]
           gi|355509871|gb|AES91013.1| Deoxycytidylate deaminase
           [Medicago truncatula]
          Length = 185

 Score =  239 bits (610), Expect = 2e-61
 Identities = 111/120 (92%), Positives = 117/120 (97%)
 Frame = +1

Query: 127 PFDPSKREGCLSWDDYFMAIAFLSAERSKDPNRQVGACLVSENGVILGIGYNGFPRGCSD 306
           PFDP+KR+G LSWDDYFMAIAFLSAERSKDPNRQVGACLVS++ +ILGIGYNGFPRGCSD
Sbjct: 62  PFDPTKRKGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDDIILGIGYNGFPRGCSD 121

Query: 307 DKLPWAKKSKTGNTLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQV 486
           DKLPWAKKS+TGN LETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQV
Sbjct: 122 DKLPWAKKSRTGNPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQV 181


>gb|ABK28591.1| unknown [Arabidopsis thaliana]
          Length = 233

 Score =  236 bits (601), Expect(2) = 4e-61
 Identities = 110/123 (89%), Positives = 115/123 (93%)
 Frame = +1

Query: 115 PRACPFDPSKREGCLSWDDYFMAIAFLSAERSKDPNRQVGACLVSENGVILGIGYNGFPR 294
           P   PF P KR G LSWDDYFMAIAFLSAERSKDPNRQVGACLVS+NGVILGIGYNGFPR
Sbjct: 52  PALDPFSPLKRNGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPR 111

Query: 295 GCSDDKLPWAKKSKTGNTLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKI 474
           GCSDDKLPWAKKS+TG+ LETKYPYVCHAEVNAILNTNHASAAGQ+LYVTMFPCNECAKI
Sbjct: 112 GCSDDKLPWAKKSRTGDPLETKYPYVCHAEVNAILNTNHASAAGQKLYVTMFPCNECAKI 171

Query: 475 IIQ 483
           I+Q
Sbjct: 172 ILQ 174



 Score = 24.6 bits (52), Expect(2) = 4e-61
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +3

Query: 480 TGVTEVIYFVEKQ 518
           +GV EVIYFVEK+
Sbjct: 175 SGVAEVIYFVEKR 187


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