BLASTX nr result

ID: Coptis23_contig00040929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040929
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272358.2| PREDICTED: TBC1 domain family member 25-like...   159   2e-37
ref|XP_003536945.1| PREDICTED: TBC1 domain family member 15-like...   154   7e-36
ref|XP_003542429.1| PREDICTED: TBC1 domain family member 15-like...   154   9e-36
ref|XP_002529839.1| conserved hypothetical protein [Ricinus comm...   154   9e-36
emb|CBI23941.3| unnamed protein product [Vitis vinifera]              152   3e-35

>ref|XP_002272358.2| PREDICTED: TBC1 domain family member 25-like [Vitis vinifera]
          Length = 451

 Score =  159 bits (403), Expect = 2e-37
 Identities = 72/136 (52%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
 Frame = +3

Query: 3   KFKPRPGRTLSERKWRSAFTEDGHLDIXXXXXXXXXXXXHPLIRAEVWEFLLGCYDPNST 182
           +FKPR G+TLS R+W +AF++DGHLDI            HP I+  VWEFLLGC+DPNST
Sbjct: 38  RFKPRAGKTLSARRWHAAFSQDGHLDIEKVLRRIQRGGVHPSIKGVVWEFLLGCFDPNST 97

Query: 183 YEERNQLRQRKREQYGMWKTECQKMESTIGSGRYVTRPVITEDGQPIQDPSSQGDDAQEE 362
           ++ERN+LRQ++R+QYG  K ECQKM   IGSG+++T P++T DG+P+QD S+  D++Q++
Sbjct: 98  FDERNELRQQRRQQYGALKAECQKMAPVIGSGKFITTPIVTVDGRPVQDLST-NDNSQDD 156

Query: 363 NVDKATSSPVE-PCDD 407
           N   +T SP++ P DD
Sbjct: 157 NRATSTPSPLDSPLDD 172


>ref|XP_003536945.1| PREDICTED: TBC1 domain family member 15-like [Glycine max]
          Length = 424

 Score =  154 bits (389), Expect = 7e-36
 Identities = 69/122 (56%), Positives = 90/122 (73%)
 Frame = +3

Query: 3   KFKPRPGRTLSERKWRSAFTEDGHLDIXXXXXXXXXXXXHPLIRAEVWEFLLGCYDPNST 182
           +FKPR G+TLS+R+W+++F++DGHLDI            HP I+ EVWEFLLGCYDPNST
Sbjct: 38  RFKPRAGKTLSQRRWQASFSQDGHLDIAKVLRRIQRGGVHPSIKGEVWEFLLGCYDPNST 97

Query: 183 YEERNQLRQRKREQYGMWKTECQKMESTIGSGRYVTRPVITEDGQPIQDPSSQGDDAQEE 362
            EERN+L+QR+R QY MWK ECQKM   IGSG+++T P+I ++GQPI DPS  G    ++
Sbjct: 98  LEERNELKQRRRGQYDMWKAECQKMVPVIGSGKFITTPLIDDEGQPI-DPSMVGVQTSDK 156

Query: 363 NV 368
            V
Sbjct: 157 KV 158


>ref|XP_003542429.1| PREDICTED: TBC1 domain family member 15-like [Glycine max]
          Length = 413

 Score =  154 bits (388), Expect = 9e-36
 Identities = 69/122 (56%), Positives = 90/122 (73%)
 Frame = +3

Query: 3   KFKPRPGRTLSERKWRSAFTEDGHLDIXXXXXXXXXXXXHPLIRAEVWEFLLGCYDPNST 182
           +FKPR G+TLS+R+W+++F++DGHLDI            HP I+ EVWEFLLGCYDPNST
Sbjct: 27  RFKPRAGKTLSQRRWQASFSQDGHLDIAKVLRRIQRGGVHPSIKGEVWEFLLGCYDPNST 86

Query: 183 YEERNQLRQRKREQYGMWKTECQKMESTIGSGRYVTRPVITEDGQPIQDPSSQGDDAQEE 362
            EERN+L+QR+R QY MWK ECQKM   IGSG+++T P+I ++GQPI DPS  G    ++
Sbjct: 87  LEERNELKQRRRGQYDMWKAECQKMVPVIGSGKFITTPLIDDEGQPI-DPSLVGVQTSDK 145

Query: 363 NV 368
            V
Sbjct: 146 KV 147


>ref|XP_002529839.1| conserved hypothetical protein [Ricinus communis]
           gi|223530667|gb|EEF32540.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 421

 Score =  154 bits (388), Expect = 9e-36
 Identities = 68/115 (59%), Positives = 82/115 (71%)
 Frame = +3

Query: 3   KFKPRPGRTLSERKWRSAFTEDGHLDIXXXXXXXXXXXXHPLIRAEVWEFLLGCYDPNST 182
           +FKPR G+TLS R+W +AF+ DGHLDI            HP I+  VWEFLLGCYDPNST
Sbjct: 35  RFKPRAGKTLSSRRWHAAFSGDGHLDIAKVLRRIQRGGVHPTIKGLVWEFLLGCYDPNST 94

Query: 183 YEERNQLRQRKREQYGMWKTECQKMESTIGSGRYVTRPVITEDGQPIQDPSSQGD 347
           +EERNQLRQ +REQY  WK +CQ M   IGSG+++T P+IT+DGQPI D S   D
Sbjct: 95  FEERNQLRQNRREQYCRWKADCQNMVPVIGSGKFITTPIITDDGQPIMDSSRNND 149


>emb|CBI23941.3| unnamed protein product [Vitis vinifera]
          Length = 426

 Score =  152 bits (384), Expect = 3e-35
 Identities = 67/119 (56%), Positives = 86/119 (72%)
 Frame = +3

Query: 3   KFKPRPGRTLSERKWRSAFTEDGHLDIXXXXXXXXXXXXHPLIRAEVWEFLLGCYDPNST 182
           +FK + G+TLSER+W++AF+ +GHL++            HP IR EVWEFLLGCYDP ST
Sbjct: 26  RFKIKAGKTLSERRWKAAFSPEGHLEMSRMLSRIQRGGIHPTIRGEVWEFLLGCYDPKST 85

Query: 183 YEERNQLRQRKREQYGMWKTECQKMESTIGSGRYVTRPVITEDGQPIQDPSSQGDDAQE 359
           YEER Q+RQR+REQY  WK +C +M   IGSGRY+T P+IT+DGQPIQDP     ++ E
Sbjct: 86  YEEREQIRQRRREQYAKWKEQCCQMFPVIGSGRYITAPIITDDGQPIQDPLLSTSNSSE 144


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