BLASTX nr result

ID: Coptis23_contig00040902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040902
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307564.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002283205.1| PREDICTED: uncharacterized protein LOC100247...    81   8e-14
ref|XP_002300865.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
ref|XP_002530206.1| conserved hypothetical protein [Ricinus comm...    79   4e-13
ref|XP_003519537.1| PREDICTED: uncharacterized protein LOC100818...    71   8e-11

>ref|XP_002307564.1| predicted protein [Populus trichocarpa] gi|222857013|gb|EEE94560.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 50/103 (48%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
 Frame = -3

Query: 310 SPCQES--IGSELKAEAKFLKSCGALLETPVEIRKASGRVKAVLPHNEGSANTKFHSWLP 137
           +PC  S  I   L+ EAKFLK+CG L ETP+EIRKA  +       ++ S  +KFHSWLP
Sbjct: 45  NPCLGSPHINKGLRDEAKFLKACGTLTETPIEIRKACEKFNGSPTLDKDSEPSKFHSWLP 104

Query: 136 TTSIENLHLEGQQNQFLVTPVKVSDSQGKESGSPGQEHTTSST 8
           +TSI+ L L+ Q +Q L TPVK+ +  GK  GS   E T SS+
Sbjct: 105 STSIKKLQLDNQTDQPL-TPVKLCEEWGK--GSVSSEQTPSSS 144


>ref|XP_002283205.1| PREDICTED: uncharacterized protein LOC100247266 [Vitis vinifera]
           gi|302143518|emb|CBI22079.3| unnamed protein product
           [Vitis vinifera]
          Length = 505

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 49/107 (45%), Positives = 63/107 (58%), Gaps = 10/107 (9%)
 Frame = -3

Query: 298 ESIGSELKAEAKFLKSCGALLETPVEIRKASGRVKAVLPHNEGSANTKFHSWLPTTSIEN 119
           E+I  ELK EA+FLK+CG L+ETP EIRKAS R+K+    +    ++KFHSWLP TSI+ 
Sbjct: 85  ENIDKELKDEARFLKACGTLVETPAEIRKASRRLKSSPSQDGDLEHSKFHSWLPNTSIKK 144

Query: 118 LHLEGQQNQFLVTPVKVSDSQGKESG----------SPGQEHTTSST 8
           L L+ Q  +   TP+K  +   KES           S GQ  T  ST
Sbjct: 145 LQLDKQPVE-PPTPIKQCEEWRKESSLLEQTPSSCISNGQSSTEGST 190


>ref|XP_002300865.1| predicted protein [Populus trichocarpa] gi|222842591|gb|EEE80138.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 50/102 (49%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
 Frame = -3

Query: 310 SPCQES--IGSELKAEAKFLKSCGALLETPVEIRKASGRVKAVLPHNEGSANTKFHSWLP 137
           +PC  S  I   L+ EAKFLK+CG L ETP EIRKA  + K     ++ S ++KFHSWLP
Sbjct: 76  NPCLGSPQINKGLRDEAKFLKACGTLPETPTEIRKACDKFKGSPGLDKYSESSKFHSWLP 135

Query: 136 TTSIENLHLEGQQNQFLVTPVKVSDSQGKESGSPGQEHTTSS 11
            TS+E L L+  QN+   TPVK+ +  GK  GS   E T SS
Sbjct: 136 NTSMEKLQLD-NQNEDSRTPVKLWEELGK--GSFSSEQTPSS 174


>ref|XP_002530206.1| conserved hypothetical protein [Ricinus communis]
           gi|223530282|gb|EEF32180.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 461

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 50/106 (47%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
 Frame = -3

Query: 322 NEGSSPCQES--IGSELKAEAKFLKSCGALLETPVEIRKASGRVKAVLPHNEGSANTKFH 149
           N+  S C  S  I  EL  EAKFLK+CG L ETP EIRKAS +++   P  + S +  FH
Sbjct: 56  NKRKSDCFGSPQINKELANEAKFLKACGTLPETPSEIRKASEKLRVSPPAGKNSQSLDFH 115

Query: 148 SWLPTTSIENLHLEGQQNQFLVTPVKVSDSQGKESGSPGQEHTTSS 11
           SWLP+TSI+ L L+ + +Q   TPVK+ +  G   GS   E T SS
Sbjct: 116 SWLPSTSIKKLQLDKEIDQ-PPTPVKLCEEWG--HGSVYSEQTPSS 158


>ref|XP_003519537.1| PREDICTED: uncharacterized protein LOC100818713 [Glycine max]
          Length = 452

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 42/90 (46%), Positives = 54/90 (60%)
 Frame = -3

Query: 280 LKAEAKFLKSCGALLETPVEIRKASGRVKAVLPHNEGSANTKFHSWLPTTSIENLHLEGQ 101
           LK EAKFLK+CG L  TPVEIRKAS ++KA    ++ S +++FH WLP TS+E L L+ Q
Sbjct: 93  LKDEAKFLKACGTLTGTPVEIRKASEKLKASPAPDKDSEHSRFHCWLPNTSVEKLQLDVQ 152

Query: 100 QNQFLVTPVKVSDSQGKESGSPGQEHTTSS 11
                 TP+ +    G    S   EHT  S
Sbjct: 153 PFD-PPTPINLCQKLGNSMDS--FEHTPIS 179


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