BLASTX nr result

ID: Coptis23_contig00040888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040888
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525082.1| conserved hypothetical protein [Ricinus comm...    56   4e-06

>ref|XP_002525082.1| conserved hypothetical protein [Ricinus communis]
           gi|223535663|gb|EEF37329.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 191

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 38/92 (41%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
 Frame = +3

Query: 222 RRKPSLSFTTRAT---DPEIEAKTTETETPQDSEDNESFENRLAQVRLRYKSXXXXXXXX 392
           + KP LSFTTRAT   DP+ E++T+      DS D++ FE+RL+ VRLRY+S        
Sbjct: 29  KSKPYLSFTTRATTDDDPQPESQTSRPAPGSDS-DSDPFESRLSNVRLRYRS----GTGK 83

Query: 393 XXXXXXXXXXXXXXXXXXXLFLPPVPLKEPVS 488
                              L+LPPVPLKE VS
Sbjct: 84  KAEVRKSKKGVSKSGTGSGLYLPPVPLKEAVS 115


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