BLASTX nr result
ID: Coptis23_contig00040875
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00040875 (303 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAM11099.1| ABC protein [Coptis japonica] 198 4e-49 dbj|BAM11098.1| ABC protein [Coptis japonica] 136 2e-30 dbj|BAB62040.1| CjMDR1 [Coptis japonica] 135 3e-30 ref|XP_003609885.1| ABC transporter B family member [Medicago tr... 132 2e-29 ref|XP_003550577.1| PREDICTED: ABC transporter B family member 1... 131 5e-29 >dbj|BAM11099.1| ABC protein [Coptis japonica] Length = 1288 Score = 198 bits (503), Expect = 4e-49 Identities = 99/100 (99%), Positives = 100/100 (100%) Frame = +2 Query: 2 TVASFCAEEKVITLYKSKCERPRSTAIKLGVMSGIDYGISFFLLFAFYAISFYVGSRLVE 181 TVASFCAEEKVITLYKSKC+RPRSTAIKLGVMSGIDYGISFFLLFAFYAISFYVGSRLVE Sbjct: 917 TVASFCAEEKVITLYKSKCQRPRSTAIKLGVMSGIDYGISFFLLFAFYAISFYVGSRLVE 976 Query: 182 DGKTGFSNIFRVFFALCMAGIGISQRSSLATDATKTKACT 301 DGKTGFSNIFRVFFALCMAGIGISQRSSLATDATKTKACT Sbjct: 977 DGKTGFSNIFRVFFALCMAGIGISQRSSLATDATKTKACT 1016 >dbj|BAM11098.1| ABC protein [Coptis japonica] Length = 1292 Score = 136 bits (343), Expect = 2e-30 Identities = 66/100 (66%), Positives = 80/100 (80%) Frame = +2 Query: 2 TVASFCAEEKVITLYKSKCERPRSTAIKLGVMSGIDYGISFFLLFAFYAISFYVGSRLVE 181 TVASFCAEEKV+ LYK KCE P T I+ G++SGI +G+SFFLL+ YA SFYVG+RLVE Sbjct: 920 TVASFCAEEKVMQLYKKKCEGPMKTGIRQGLISGIGFGVSFFLLYNVYATSFYVGARLVE 979 Query: 182 DGKTGFSNIFRVFFALCMAGIGISQRSSLATDATKTKACT 301 DGKT F+ +FRVFFAL MA +GISQ SS A D++K +A T Sbjct: 980 DGKTTFAEVFRVFFALTMAALGISQSSSFAPDSSKARAST 1019 >dbj|BAB62040.1| CjMDR1 [Coptis japonica] Length = 1289 Score = 135 bits (340), Expect = 3e-30 Identities = 67/100 (67%), Positives = 80/100 (80%) Frame = +2 Query: 2 TVASFCAEEKVITLYKSKCERPRSTAIKLGVMSGIDYGISFFLLFAFYAISFYVGSRLVE 181 TVASFCAEEKV+ LYK KCE P T I+ G++SGI +GISFFLLF YA SFY G+RLV+ Sbjct: 917 TVASFCAEEKVMQLYKKKCEGPMKTGIRQGLISGIGFGISFFLLFNVYATSFYAGARLVD 976 Query: 182 DGKTGFSNIFRVFFALCMAGIGISQRSSLATDATKTKACT 301 GKT FS++FRVFFAL MA +GISQ SSLA D++K K+ T Sbjct: 977 AGKTTFSDVFRVFFALTMAALGISQSSSLAPDSSKAKSST 1016 >ref|XP_003609885.1| ABC transporter B family member [Medicago truncatula] gi|355510940|gb|AES92082.1| ABC transporter B family member [Medicago truncatula] Length = 1333 Score = 132 bits (333), Expect = 2e-29 Identities = 62/98 (63%), Positives = 79/98 (80%) Frame = +2 Query: 2 TVASFCAEEKVITLYKSKCERPRSTAIKLGVMSGIDYGISFFLLFAFYAISFYVGSRLVE 181 TVASFC+EEKV+ LYK KCE P T I+ G++SG +GISFF+L++ YA+SFY G+RLVE Sbjct: 960 TVASFCSEEKVMELYKQKCEGPIKTGIRRGIVSGFGFGISFFVLYSVYALSFYAGARLVE 1019 Query: 182 DGKTGFSNIFRVFFALCMAGIGISQRSSLATDATKTKA 295 DGK+ FS++FRVFFAL MA IG+SQ SL D+TK K+ Sbjct: 1020 DGKSSFSDVFRVFFALSMAAIGLSQSGSLLPDSTKAKS 1057 >ref|XP_003550577.1| PREDICTED: ABC transporter B family member 11-like [Glycine max] Length = 1275 Score = 131 bits (330), Expect = 5e-29 Identities = 62/97 (63%), Positives = 77/97 (79%) Frame = +2 Query: 2 TVASFCAEEKVITLYKSKCERPRSTAIKLGVMSGIDYGISFFLLFAFYAISFYVGSRLVE 181 TVASFCAEEKV+ LY+ KCE P T + G++SGI +G+SFF+L+A YA SFY G+RLVE Sbjct: 903 TVASFCAEEKVMELYQEKCEGPIKTGKRQGIISGISFGVSFFMLYAVYATSFYAGARLVE 962 Query: 182 DGKTGFSNIFRVFFALCMAGIGISQRSSLATDATKTK 292 DGK+ FS++FRVFFAL MA +GISQ SL D+TK K Sbjct: 963 DGKSSFSDVFRVFFALSMAALGISQSGSLVPDSTKAK 999