BLASTX nr result

ID: Coptis23_contig00040875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040875
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM11099.1| ABC protein [Coptis japonica]                         198   4e-49
dbj|BAM11098.1| ABC protein [Coptis japonica]                         136   2e-30
dbj|BAB62040.1| CjMDR1 [Coptis japonica]                              135   3e-30
ref|XP_003609885.1| ABC transporter B family member [Medicago tr...   132   2e-29
ref|XP_003550577.1| PREDICTED: ABC transporter B family member 1...   131   5e-29

>dbj|BAM11099.1| ABC protein [Coptis japonica]
          Length = 1288

 Score =  198 bits (503), Expect = 4e-49
 Identities = 99/100 (99%), Positives = 100/100 (100%)
 Frame = +2

Query: 2    TVASFCAEEKVITLYKSKCERPRSTAIKLGVMSGIDYGISFFLLFAFYAISFYVGSRLVE 181
            TVASFCAEEKVITLYKSKC+RPRSTAIKLGVMSGIDYGISFFLLFAFYAISFYVGSRLVE
Sbjct: 917  TVASFCAEEKVITLYKSKCQRPRSTAIKLGVMSGIDYGISFFLLFAFYAISFYVGSRLVE 976

Query: 182  DGKTGFSNIFRVFFALCMAGIGISQRSSLATDATKTKACT 301
            DGKTGFSNIFRVFFALCMAGIGISQRSSLATDATKTKACT
Sbjct: 977  DGKTGFSNIFRVFFALCMAGIGISQRSSLATDATKTKACT 1016


>dbj|BAM11098.1| ABC protein [Coptis japonica]
          Length = 1292

 Score =  136 bits (343), Expect = 2e-30
 Identities = 66/100 (66%), Positives = 80/100 (80%)
 Frame = +2

Query: 2    TVASFCAEEKVITLYKSKCERPRSTAIKLGVMSGIDYGISFFLLFAFYAISFYVGSRLVE 181
            TVASFCAEEKV+ LYK KCE P  T I+ G++SGI +G+SFFLL+  YA SFYVG+RLVE
Sbjct: 920  TVASFCAEEKVMQLYKKKCEGPMKTGIRQGLISGIGFGVSFFLLYNVYATSFYVGARLVE 979

Query: 182  DGKTGFSNIFRVFFALCMAGIGISQRSSLATDATKTKACT 301
            DGKT F+ +FRVFFAL MA +GISQ SS A D++K +A T
Sbjct: 980  DGKTTFAEVFRVFFALTMAALGISQSSSFAPDSSKARAST 1019


>dbj|BAB62040.1| CjMDR1 [Coptis japonica]
          Length = 1289

 Score =  135 bits (340), Expect = 3e-30
 Identities = 67/100 (67%), Positives = 80/100 (80%)
 Frame = +2

Query: 2    TVASFCAEEKVITLYKSKCERPRSTAIKLGVMSGIDYGISFFLLFAFYAISFYVGSRLVE 181
            TVASFCAEEKV+ LYK KCE P  T I+ G++SGI +GISFFLLF  YA SFY G+RLV+
Sbjct: 917  TVASFCAEEKVMQLYKKKCEGPMKTGIRQGLISGIGFGISFFLLFNVYATSFYAGARLVD 976

Query: 182  DGKTGFSNIFRVFFALCMAGIGISQRSSLATDATKTKACT 301
             GKT FS++FRVFFAL MA +GISQ SSLA D++K K+ T
Sbjct: 977  AGKTTFSDVFRVFFALTMAALGISQSSSLAPDSSKAKSST 1016


>ref|XP_003609885.1| ABC transporter B family member [Medicago truncatula]
            gi|355510940|gb|AES92082.1| ABC transporter B family
            member [Medicago truncatula]
          Length = 1333

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/98 (63%), Positives = 79/98 (80%)
 Frame = +2

Query: 2    TVASFCAEEKVITLYKSKCERPRSTAIKLGVMSGIDYGISFFLLFAFYAISFYVGSRLVE 181
            TVASFC+EEKV+ LYK KCE P  T I+ G++SG  +GISFF+L++ YA+SFY G+RLVE
Sbjct: 960  TVASFCSEEKVMELYKQKCEGPIKTGIRRGIVSGFGFGISFFVLYSVYALSFYAGARLVE 1019

Query: 182  DGKTGFSNIFRVFFALCMAGIGISQRSSLATDATKTKA 295
            DGK+ FS++FRVFFAL MA IG+SQ  SL  D+TK K+
Sbjct: 1020 DGKSSFSDVFRVFFALSMAAIGLSQSGSLLPDSTKAKS 1057


>ref|XP_003550577.1| PREDICTED: ABC transporter B family member 11-like [Glycine max]
          Length = 1275

 Score =  131 bits (330), Expect = 5e-29
 Identities = 62/97 (63%), Positives = 77/97 (79%)
 Frame = +2

Query: 2    TVASFCAEEKVITLYKSKCERPRSTAIKLGVMSGIDYGISFFLLFAFYAISFYVGSRLVE 181
            TVASFCAEEKV+ LY+ KCE P  T  + G++SGI +G+SFF+L+A YA SFY G+RLVE
Sbjct: 903  TVASFCAEEKVMELYQEKCEGPIKTGKRQGIISGISFGVSFFMLYAVYATSFYAGARLVE 962

Query: 182  DGKTGFSNIFRVFFALCMAGIGISQRSSLATDATKTK 292
            DGK+ FS++FRVFFAL MA +GISQ  SL  D+TK K
Sbjct: 963  DGKSSFSDVFRVFFALSMAALGISQSGSLVPDSTKAK 999


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