BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040874
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD30137.1| ribosomal protein S11 [Cornus florida]                  89   2e-21
gb|ADD30146.1| ribosomal protein S11 [Staphylea colchica]              91   3e-21
gb|ADD30140.1| ribosomal protein S11 [Gunnera manicata]                91   5e-21
gb|ADD30127.1| ribosomal protein S11 [Ilex cornuta]                    89   8e-21
ref|YP_007317281.1| ribosomal protein S11 (chloroplast) [Camelli...    89   1e-20

>gb|ADD30137.1| ribosomal protein S11 [Cornus florida]
          Length = 138

 Score = 89.4 bits (220), Expect(2) = 2e-21
 Identities = 45/61 (73%), Positives = 47/61 (77%)
 Frame = +2

Query: 149 RKNARRIPKGVIHVKASFNNTIVTVTDIRGRVVSWSSXXXXXXXXXXXXXPFAAQTAAGN 328
           RKN RRIPKGVIHV+ASFNNTIVTVTD+RGRVVSWSS             PFAAQTAAGN
Sbjct: 19  RKNVRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGSCGFRGTRRGTPFAAQTAAGN 78

Query: 329 A 331
           A
Sbjct: 79  A 79



 Score = 38.1 bits (87), Expect(2) = 2e-21
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +1

Query: 97  MAKAIPRIGSRRNARIGS 150
           MAKAIPRIGSRRNARIGS
Sbjct: 1   MAKAIPRIGSRRNARIGS 18


>gb|ADD30146.1| ribosomal protein S11 [Staphylea colchica]
          Length = 138

 Score = 90.5 bits (223), Expect(2) = 3e-21
 Identities = 45/61 (73%), Positives = 48/61 (78%)
 Frame = +2

Query: 149 RKNARRIPKGVIHVKASFNNTIVTVTDIRGRVVSWSSXXXXXXXXXXXXXPFAAQTAAGN 328
           RKNARRIPKGVIHV+ASFNNTIVTVTD+RGRV+SWSS             PFAAQTAAGN
Sbjct: 19  RKNARRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTRRGTPFAAQTAAGN 78

Query: 329 A 331
           A
Sbjct: 79  A 79



 Score = 36.2 bits (82), Expect(2) = 3e-21
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +1

Query: 97  MAKAIPRIGSRRNARIGS 150
           MAK IPRIGSRRNARIGS
Sbjct: 1   MAKLIPRIGSRRNARIGS 18


>gb|ADD30140.1| ribosomal protein S11 [Gunnera manicata]
          Length = 138

 Score = 91.3 bits (225), Expect(2) = 5e-21
 Identities = 47/61 (77%), Positives = 48/61 (78%)
 Frame = +2

Query: 149 RKNARRIPKGVIHVKASFNNTIVTVTDIRGRVVSWSSXXXXXXXXXXXXXPFAAQTAAGN 328
           RKNARRIPKGVIHV+ASFNNTIVTVTDIRGRVVSWSS             PFAAQTAAGN
Sbjct: 19  RKNARRIPKGVIHVQASFNNTIVTVTDIRGRVVSWSSAGTCGFSGTRRGTPFAAQTAAGN 78

Query: 329 A 331
           A
Sbjct: 79  A 79



 Score = 34.7 bits (78), Expect(2) = 5e-21
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = +1

Query: 97  MAKAIPRIGSRRNARIGS 150
           MAK IPRIGSRRN RIGS
Sbjct: 1   MAKPIPRIGSRRNGRIGS 18


>gb|ADD30127.1| ribosomal protein S11 [Ilex cornuta]
          Length = 138

 Score = 89.0 bits (219), Expect(2) = 8e-21
 Identities = 45/61 (73%), Positives = 48/61 (78%)
 Frame = +2

Query: 149 RKNARRIPKGVIHVKASFNNTIVTVTDIRGRVVSWSSXXXXXXXXXXXXXPFAAQTAAGN 328
           RK+ARRIPKGVIHV+ASFNNTIVTVTD+RGRVVSWSS             PFAAQTAAGN
Sbjct: 19  RKSARRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCGFRGTRRGTPFAAQTAAGN 78

Query: 329 A 331
           A
Sbjct: 79  A 79



 Score = 36.2 bits (82), Expect(2) = 8e-21
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +1

Query: 97  MAKAIPRIGSRRNARIGS 150
           MAKAIPR+GSRRN RIGS
Sbjct: 1   MAKAIPRVGSRRNGRIGS 18


>ref|YP_007317281.1| ribosomal protein S11 (chloroplast) [Camellia sinensis]
           gi|430728305|gb|AGA55629.1| ribosomal protein S11
           (chloroplast) [Camellia sinensis]
          Length = 138

 Score = 89.4 bits (220), Expect(2) = 1e-20
 Identities = 45/61 (73%), Positives = 47/61 (77%)
 Frame = +2

Query: 149 RKNARRIPKGVIHVKASFNNTIVTVTDIRGRVVSWSSXXXXXXXXXXXXXPFAAQTAAGN 328
           RKN RRIPKGVIHV+ASFNNTIVTVTD+RGRVVSWSS             PFAAQTAAGN
Sbjct: 19  RKNTRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCGFRGTRRGTPFAAQTAAGN 78

Query: 329 A 331
           A
Sbjct: 79  A 79



 Score = 35.0 bits (79), Expect(2) = 1e-20
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = +1

Query: 97  MAKAIPRIGSRRNARIGS 150
           MAK IPRIGSRRN RIGS
Sbjct: 1   MAKTIPRIGSRRNGRIGS 18