BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040864
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm...   265   3e-69
emb|CBI16383.3| unnamed protein product [Vitis vinifera]              260   9e-68
ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnm...   260   9e-68
ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-m...   258   3e-67
ref|XP_002298404.1| predicted protein [Populus trichocarpa] gi|2...   256   2e-66

>ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Cucumis
           sativus] gi|449524848|ref|XP_004169433.1| PREDICTED:
           tRNA-specific 2-thiouridylase MnmA-like [Cucumis
           sativus]
          Length = 538

 Score =  265 bits (677), Expect = 3e-69
 Identities = 121/143 (84%), Positives = 132/143 (92%)
 Frame = -2

Query: 429 GHSCTAFYLKIWFQEDYENFWAACPWDEDLKYAEAVCDQIGVPLEVVHLTEEYWSNVVSY 250
           GHSCTAFYLKIWFQED+ENFW+ CPWD+DLKYA+AVCDQ+ VPLEVVHLTEEYW NVVSY
Sbjct: 105 GHSCTAFYLKIWFQEDFENFWSECPWDDDLKYAKAVCDQVDVPLEVVHLTEEYWRNVVSY 164

Query: 249 IIEEYRCGRTPNPDVLCNTRIKFGAFMNAISSMEFDYVASGHYARVVHSSSEQDGDASVL 70
           IIEEYRCGRTPNPDVLCNTRIKFGAFM+AIS+MEFDYVASGHYA V+H S++Q    SVL
Sbjct: 165 IIEEYRCGRTPNPDVLCNTRIKFGAFMDAISNMEFDYVASGHYANVIHPSADQMDKPSVL 224

Query: 69  ELSNDTVKDQTYFLSHLSQDQLK 1
           ELS D VKDQTYFLSHLSQ+QLK
Sbjct: 225 ELSKDMVKDQTYFLSHLSQNQLK 247


>emb|CBI16383.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score =  260 bits (664), Expect = 9e-68
 Identities = 120/143 (83%), Positives = 130/143 (90%)
 Frame = -2

Query: 429 GHSCTAFYLKIWFQEDYENFWAACPWDEDLKYAEAVCDQIGVPLEVVHLTEEYWSNVVSY 250
           GHSCTAFYLKIWFQED+ENFW+ CPW++DLKYA+AVCDQ+ VPLEVVHLT+EYW NVVSY
Sbjct: 111 GHSCTAFYLKIWFQEDFENFWSECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWKNVVSY 170

Query: 249 IIEEYRCGRTPNPDVLCNTRIKFGAFMNAISSMEFDYVASGHYARVVHSSSEQDGDASVL 70
           IIEEYRCGRTPNPDVLCNTRIKFGAFM+AISS EFDYVASGHYA VVHS ++Q    SVL
Sbjct: 171 IIEEYRCGRTPNPDVLCNTRIKFGAFMDAISSKEFDYVASGHYANVVHSFTDQMDKPSVL 230

Query: 69  ELSNDTVKDQTYFLSHLSQDQLK 1
           ELS D VKDQTYFLSHLSQ QLK
Sbjct: 231 ELSKDMVKDQTYFLSHLSQIQLK 253


>ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Vitis vinifera]
          Length = 540

 Score =  260 bits (664), Expect = 9e-68
 Identities = 120/143 (83%), Positives = 130/143 (90%)
 Frame = -2

Query: 429 GHSCTAFYLKIWFQEDYENFWAACPWDEDLKYAEAVCDQIGVPLEVVHLTEEYWSNVVSY 250
           GHSCTAFYLKIWFQED+ENFW+ CPW++DLKYA+AVCDQ+ VPLEVVHLT+EYW NVVSY
Sbjct: 107 GHSCTAFYLKIWFQEDFENFWSECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWKNVVSY 166

Query: 249 IIEEYRCGRTPNPDVLCNTRIKFGAFMNAISSMEFDYVASGHYARVVHSSSEQDGDASVL 70
           IIEEYRCGRTPNPDVLCNTRIKFGAFM+AISS EFDYVASGHYA VVHS ++Q    SVL
Sbjct: 167 IIEEYRCGRTPNPDVLCNTRIKFGAFMDAISSKEFDYVASGHYANVVHSFTDQMDKPSVL 226

Query: 69  ELSNDTVKDQTYFLSHLSQDQLK 1
           ELS D VKDQTYFLSHLSQ QLK
Sbjct: 227 ELSKDMVKDQTYFLSHLSQIQLK 249


>ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
           putative [Ricinus communis] gi|223547418|gb|EEF48913.1|
           tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
           putative [Ricinus communis]
          Length = 497

 Score =  258 bits (660), Expect = 3e-67
 Identities = 115/143 (80%), Positives = 131/143 (91%)
 Frame = -2

Query: 429 GHSCTAFYLKIWFQEDYENFWAACPWDEDLKYAEAVCDQIGVPLEVVHLTEEYWSNVVSY 250
           GH CTAFYLKIWFQED+ENFW+ CPW+EDLKYA+AVCDQ+ +PLEVVHLT+EYW NVVSY
Sbjct: 94  GHHCTAFYLKIWFQEDFENFWSECPWEEDLKYAKAVCDQVDIPLEVVHLTDEYWKNVVSY 153

Query: 249 IIEEYRCGRTPNPDVLCNTRIKFGAFMNAISSMEFDYVASGHYARVVHSSSEQDGDASVL 70
           IIEEYRCGRTPNPDVLCNTRIKFGAFM+AI++MEFDYVASGHYA+V+H S+++    SVL
Sbjct: 154 IIEEYRCGRTPNPDVLCNTRIKFGAFMDAINNMEFDYVASGHYAKVIHPSADEINQPSVL 213

Query: 69  ELSNDTVKDQTYFLSHLSQDQLK 1
           ELS D VKDQTYFLSHLSQ QL+
Sbjct: 214 ELSKDMVKDQTYFLSHLSQAQLR 236


>ref|XP_002298404.1| predicted protein [Populus trichocarpa] gi|222845662|gb|EEE83209.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  256 bits (653), Expect = 2e-66
 Identities = 115/143 (80%), Positives = 129/143 (90%)
 Frame = -2

Query: 429 GHSCTAFYLKIWFQEDYENFWAACPWDEDLKYAEAVCDQIGVPLEVVHLTEEYWSNVVSY 250
           GH CTAFYLKIWFQED+ NFW+ CPW+EDLK+A+ VCDQ+GVPLEVVHLT+EYWSNVVSY
Sbjct: 31  GHHCTAFYLKIWFQEDFNNFWSECPWEEDLKFAKGVCDQVGVPLEVVHLTDEYWSNVVSY 90

Query: 249 IIEEYRCGRTPNPDVLCNTRIKFGAFMNAISSMEFDYVASGHYARVVHSSSEQDGDASVL 70
           IIEEYRCGRTPNPDVLCNTRIKFGAFM+AI++MEFDYVASGHYA V+H  S+Q    SVL
Sbjct: 91  IIEEYRCGRTPNPDVLCNTRIKFGAFMDAINNMEFDYVASGHYAHVIHPVSDQINKPSVL 150

Query: 69  ELSNDTVKDQTYFLSHLSQDQLK 1
           ELS D +KDQTYFLSHL+Q QLK
Sbjct: 151 ELSKDKLKDQTYFLSHLTQAQLK 173