BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040862
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528720.1| conserved hypothetical protein [Ricinus comm...    92   4e-17
ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                  82   6e-14
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                  82   6e-14
ref|XP_002534679.1| conserved hypothetical protein [Ricinus comm...    77   1e-12

>ref|XP_002528720.1| conserved hypothetical protein [Ricinus communis]
           gi|223531814|gb|EEF33632.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 40/79 (50%), Positives = 56/79 (70%)
 Frame = -2

Query: 240 SDIRVDIPEFHGRLQPDDFLDWLNKVEKVFEYKGLTAPKRVRLVATKLSGYALIWWDELQ 61
           S +R +IPEFHG LQ ++FLDWL  VE++ ++KG+   K V LVAT+L G A+ WW + +
Sbjct: 44  SGMRTEIPEFHGSLQAEEFLDWLATVEEILDFKGVQEDKCVPLVATRLKGRAIAWWQQSK 103

Query: 60  ACRIRIGK*KIVTWNKMRR 4
             R R+GK KI TW KM++
Sbjct: 104 LTRTRLGKDKIATWEKMKK 122


>ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|222839713|gb|EEE78036.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 37/77 (48%), Positives = 54/77 (70%)
 Frame = -2

Query: 234 IRVDIPEFHGRLQPDDFLDWLNKVEKVFEYKGLTAPKRVRLVATKLSGYALIWWDELQAC 55
           ++VDIPEFH  LQ D++LDW+N V++V E+K +   +RV LVAT+L G A  WW +++  
Sbjct: 87  LKVDIPEFHVGLQADEYLDWINTVDEVLEFKQVPEDRRVALVATRLRGRAGAWWQQVKKT 146

Query: 54  RIRIGK*KIVTWNKMRR 4
           R   GK KI  W+KM++
Sbjct: 147 RTLQGKGKITCWDKMKK 163


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 34/79 (43%), Positives = 54/79 (68%)
 Frame = -2

Query: 237 DIRVDIPEFHGRLQPDDFLDWLNKVEKVFEYKGLTAPKRVRLVATKLSGYALIWWDELQA 58
           D++V+IP+FHG L P+D LDW   +E+VFE+KG +  K  ++   KL GYA +W++ L+ 
Sbjct: 87  DLKVEIPDFHGSLNPEDLLDWFRTIERVFEFKGYSDGKAFKVAILKLKGYASLWYENLKN 146

Query: 57  CRIRIGK*KIVTWNKMRRE 1
            R R GK  I +W K++++
Sbjct: 147 QRRRDGKEPIKSWLKLKKK 165


>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 34/78 (43%), Positives = 53/78 (67%)
 Frame = -2

Query: 234 IRVDIPEFHGRLQPDDFLDWLNKVEKVFEYKGLTAPKRVRLVATKLSGYALIWWDELQAC 55
           I+V+IPEF G L PDD L+W+  VEK+FEYK     K  ++   KL GYA +W+D L+  
Sbjct: 90  IKVEIPEFSGSLNPDDLLEWIRDVEKIFEYKNYNDVKACKVAVLKLKGYASLWYDNLKHQ 149

Query: 54  RIRIGK*KIVTWNKMRRE 1
           R++ GK  + +W+K++++
Sbjct: 150 RLKEGKDPLRSWSKLKKK 167


>ref|XP_002534679.1| conserved hypothetical protein [Ricinus communis]
           gi|223524777|gb|EEF27704.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 272

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/79 (46%), Positives = 51/79 (64%)
 Frame = -2

Query: 240 SDIRVDIPEFHGRLQPDDFLDWLNKVEKVFEYKGLTAPKRVRLVATKLSGYALIWWDELQ 61
           S +R +I EFHG LQ ++ LDWL  VE++ ++K +   KRV LVAT+L   A  WW + +
Sbjct: 53  SGMRTEILEFHGSLQAEELLDWLAMVEEILDFKWVPEDKRVPLVATRLRDRATAWWQQSK 112

Query: 60  ACRIRIGK*KIVTWNKMRR 4
             R R+GK KI T  KMR+
Sbjct: 113 LTRTRLGKDKIATSEKMRK 131