BLASTX nr result

ID: Coptis23_contig00040860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040860
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242204.1| uncharacterized protein LOC100793935 [Glycin...    85   5e-15
ref|XP_003536156.1| PREDICTED: protein pelota-like [Glycine max]       83   3e-14
ref|XP_002306749.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
gb|AFK44526.1| unknown [Lotus japonicus]                               82   6e-14
ref|XP_002867488.1| hypothetical protein ARALYDRAFT_492022 [Arab...    81   8e-14

>ref|NP_001242204.1| uncharacterized protein LOC100793935 [Glycine max]
           gi|255640054|gb|ACU20318.1| unknown [Glycine max]
          Length = 379

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
 Frame = -3

Query: 294 KDEFHRYLIPEARSLQLKPIVNKKVRFVLISSTS---QSLKEVLDSPAVKKFVNDRGEVE 124
           KD+FHR+L  EA   QL+PI+  K R +L+ ++S    SLKEVLD+P V   + D    +
Sbjct: 215 KDQFHRHLFLEAERRQLRPIIENKSRIILVHTSSGYKHSLKEVLDAPNVMSLIKDTKAAQ 274

Query: 123 DSKVFNDFNVAHLSDMGRSCYGWESVRKANELCAIQTLLVT 1
           + +V  DF     +D  R+CYG + V  ANE  A+QTLL+T
Sbjct: 275 EVRVMKDFYDMLSNDPSRACYGMKHVEVANERLAVQTLLIT 315


>ref|XP_003536156.1| PREDICTED: protein pelota-like [Glycine max]
          Length = 379

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
 Frame = -3

Query: 294 KDEFHRYLIPEARSLQLKPIVNKKVRFVLISSTS---QSLKEVLDSPAVKKFVNDRGEVE 124
           KD+FHR+L  EA   QL+PI+  K R +L+ ++S    SLKEVLD+P V   + D    +
Sbjct: 215 KDQFHRHLFLEAERRQLRPIIENKSRIILVHTSSGYKHSLKEVLDAPNVMSLIKDTKAAQ 274

Query: 123 DSKVFNDFNVAHLSDMGRSCYGWESVRKANELCAIQTLLVT 1
           + +V  DF     +D  R+CYG + V  ANE  A+Q LL+T
Sbjct: 275 EVRVMKDFYDMLSNDPSRACYGMKHVEVANERLAVQMLLIT 315


>ref|XP_002306749.1| predicted protein [Populus trichocarpa] gi|222856198|gb|EEE93745.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
 Frame = -3

Query: 294 KDEFHRYLIPEARSLQLKPIVNKKVRFVLISSTS---QSLKEVLDSPAVKKFVNDRGEVE 124
           KD+FHR+L+ EA   QL+PI+  K R VL+ ++S    SLKEVLD+P V   + D    +
Sbjct: 213 KDQFHRHLLLEAERRQLRPIIENKSRIVLVHTSSGYKHSLKEVLDAPNVMNMIKDTKAAQ 272

Query: 123 DSKVFNDFNVAHLSDMGRSCYGWESVRKANELCAIQTLLVT 1
           + +V  DF     +D  R+CYG + V  A+E  A+QTLL+T
Sbjct: 273 EVRVLKDFFDMLSNDPDRACYGPKHVEVAHERMAVQTLLIT 313


>gb|AFK44526.1| unknown [Lotus japonicus]
          Length = 237

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
 Frame = -3

Query: 294 KDEFHRYLIPEARSLQLKPIVNKKVRFVLISSTS---QSLKEVLDSPAVKKFVNDRGEVE 124
           KD+FHR+L  EA   QL+ I+  K R +L+ +TS    SL+EVLD+P V   + D    +
Sbjct: 73  KDQFHRHLFLEAERRQLRTIIENKSRILLVHTTSGYKHSLREVLDTPNVVNLIKDTKAAQ 132

Query: 123 DSKVFNDFNVAHLSDMGRSCYGWESVRKANELCAIQTLLVT 1
           + +V  DF     +D  R+CYG + V  ANE  A+QTLL+T
Sbjct: 133 EVRVLQDFYNMLSNDSARACYGMKHVEVANERLAVQTLLIT 173


>ref|XP_002867488.1| hypothetical protein ARALYDRAFT_492022 [Arabidopsis lyrata subsp.
           lyrata] gi|297313324|gb|EFH43747.1| hypothetical protein
           ARALYDRAFT_492022 [Arabidopsis lyrata subsp. lyrata]
          Length = 378

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
 Frame = -3

Query: 294 KDEFHRYLIPEARSLQLKPIVNKKVRFVLISSTS---QSLKEVLDSPAVKKFVNDRGEVE 124
           KD+FHR+L+ EA   QL+PI+  K R +L+ + S    SL EVL +P V   + D    +
Sbjct: 214 KDQFHRHLLLEAERRQLRPIIENKSRIILVHTNSGYRHSLGEVLHAPNVMNMIKDTKAAK 273

Query: 123 DSKVFNDFNVAHLSDMGRSCYGWESVRKANELCAIQTLLVT 1
           + K  NDF+    ++  R+CYG + V  ANE  AIQTLL+T
Sbjct: 274 EVKALNDFHTMLSNEPDRACYGPKHVEVANERMAIQTLLIT 314


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