BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040851
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200922.2| U5 small nuclear ribonucleoprotein helicase [Ar...    74   2e-11
ref|NP_001190584.1| U5 small nuclear ribonucleoprotein helicase ...    74   2e-11
ref|XP_002864717.1| hypothetical protein ARALYDRAFT_919354 [Arab...    74   2e-11
ref|XP_002514664.1| activating signal cointegrator 1 complex sub...    71   1e-10
ref|XP_002284129.1| PREDICTED: activating signal cointegrator 1 ...    70   1e-10

>ref|NP_200922.2| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]
           gi|332010042|gb|AED97425.1| U5 small nuclear
           ribonucleoprotein helicase [Arabidopsis thaliana]
          Length = 2146

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/52 (69%), Positives = 40/52 (76%), Gaps = 4/52 (7%)
 Frame = -1

Query: 354 DFAQTAFHGYTSLNHS*SRIFRATYHTN----VCAPPGAGQTNIAMVTVLHE 211
           DFAQ AFHGY SLN   SRIF+  YHTN    VCAP GAG+TNIAM++VLHE
Sbjct: 496 DFAQAAFHGYKSLNRIQSRIFQTVYHTNENILVCAPTGAGKTNIAMISVLHE 547


>ref|NP_001190584.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]
           gi|9759460|dbj|BAB10376.1| RNA helicase [Arabidopsis
           thaliana] gi|332010043|gb|AED97426.1| U5 small nuclear
           ribonucleoprotein helicase [Arabidopsis thaliana]
          Length = 2157

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/52 (69%), Positives = 40/52 (76%), Gaps = 4/52 (7%)
 Frame = -1

Query: 354 DFAQTAFHGYTSLNHS*SRIFRATYHTN----VCAPPGAGQTNIAMVTVLHE 211
           DFAQ AFHGY SLN   SRIF+  YHTN    VCAP GAG+TNIAM++VLHE
Sbjct: 496 DFAQAAFHGYKSLNRIQSRIFQTVYHTNENILVCAPTGAGKTNIAMISVLHE 547


>ref|XP_002864717.1| hypothetical protein ARALYDRAFT_919354 [Arabidopsis lyrata subsp.
           lyrata] gi|297310552|gb|EFH40976.1| hypothetical protein
           ARALYDRAFT_919354 [Arabidopsis lyrata subsp. lyrata]
          Length = 2112

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/52 (69%), Positives = 40/52 (76%), Gaps = 4/52 (7%)
 Frame = -1

Query: 354 DFAQTAFHGYTSLNHS*SRIFRATYHTN----VCAPPGAGQTNIAMVTVLHE 211
           DFAQ AFHGY SLN   SRIF+  YHTN    VCAP GAG+TNIAM++VLHE
Sbjct: 462 DFAQAAFHGYKSLNRIQSRIFQTVYHTNENILVCAPTGAGKTNIAMISVLHE 513


>ref|XP_002514664.1| activating signal cointegrator 1 complex subunit 3, helc1, putative
           [Ricinus communis] gi|223546268|gb|EEF47770.1|
           activating signal cointegrator 1 complex subunit 3,
           helc1, putative [Ricinus communis]
          Length = 2100

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/52 (65%), Positives = 40/52 (76%), Gaps = 4/52 (7%)
 Frame = -1

Query: 354 DFAQTAFHGYTSLNHS*SRIFRATYHTN----VCAPPGAGQTNIAMVTVLHE 211
           DFAQ AFHGY SLN   SRIF+  Y+TN    VCAP GAG+TNIAM+++LHE
Sbjct: 433 DFAQAAFHGYKSLNRIQSRIFQTVYYTNENILVCAPTGAGKTNIAMISILHE 484


>ref|XP_002284129.1| PREDICTED: activating signal cointegrator 1 complex subunit 3
           [Vitis vinifera] gi|297733882|emb|CBI15129.3| unnamed
           protein product [Vitis vinifera]
          Length = 2093

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/52 (65%), Positives = 39/52 (75%), Gaps = 4/52 (7%)
 Frame = -1

Query: 354 DFAQTAFHGYTSLNHS*SRIFRATYHTN----VCAPPGAGQTNIAMVTVLHE 211
           DFAQ AFHGY SLN   SRIF+  Y+TN    VCAP GAG+TNIAM+ +LHE
Sbjct: 429 DFAQAAFHGYKSLNRIQSRIFQTVYYTNENVLVCAPTGAGKTNIAMIAILHE 480