BLASTX nr result

ID: Coptis23_contig00040844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040844
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262931.2| PREDICTED: probable LRR receptor-like serine...    80   2e-13
emb|CBI38967.3| unnamed protein product [Vitis vinifera]               78   6e-13
ref|XP_002269212.2| PREDICTED: probable LRR receptor-like serine...    77   1e-12
ref|XP_003632830.1| PREDICTED: leucine-rich repeat receptor prot...    75   5e-12
ref|XP_003632819.1| PREDICTED: probable LRR receptor-like serine...    75   7e-12

>ref|XP_002262931.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g36180-like [Vitis vinifera]
          Length = 1231

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 52/118 (44%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
 Frame = -2

Query: 338 SDNSFSGEIPHNFVINSPTSFIRLSNNKLSGPL---SFLLNTSVSHLELNNNQFTGTIT- 171
           S NSFSGE+P   ++     F++LSNNK  G +    F L TS+  L L+NNQF GT++ 
Sbjct: 548 SANSFSGEVPKQLLVAKDLEFLKLSNNKFHGEIFSRDFNL-TSLEFLHLDNNQFKGTLSN 606

Query: 170 -IPDYRYLERFDVSQNHLSGRI-STFGNWTMLTFLILRDNLFDGPIPLEPYLLPNLQF 3
            I    +L   DVS N++SG I S  GN T LT L+L +N F G +P E   L  L+F
Sbjct: 607 VISRSSWLRVLDVSNNNMSGEIPSWIGNMTDLTTLVLGNNSFKGKLPPEISQLQRLEF 664


>emb|CBI38967.3| unnamed protein product [Vitis vinifera]
          Length = 938

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 51/118 (43%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
 Frame = -2

Query: 338 SDNSFSGEIPHNFVINSPTSFIRLSNNKLSGPL---SFLLNTSVSHLELNNNQFTGTIT- 171
           S N+FSGE+P   +     + ++LSNNK  G +    F L T +  L L+NNQFTGT++ 
Sbjct: 505 SANNFSGEVPKQLLATKHLAILKLSNNKFHGEIFSRDFNL-TQLGILYLDNNQFTGTLSN 563

Query: 170 -IPDYRYLERFDVSQNHLSGRI-STFGNWTMLTFLILRDNLFDGPIPLEPYLLPNLQF 3
            I     L   DVS N++SG I S  GN T LT L+L +N F G +PLE   L  L+F
Sbjct: 564 VISRSSSLRVLDVSNNYMSGEIPSQIGNMTYLTTLVLSNNSFKGKLPLEISQLQGLEF 621


>ref|XP_002269212.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g36180-like [Vitis vinifera]
          Length = 747

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 50/118 (42%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
 Frame = -2

Query: 338 SDNSFSGEIPHNFVINSPTSFIRLSNNKLSGPL---SFLLNTSVSHLELNNNQFTGTIT- 171
           S NSFSGE+P   +       ++LSNNK  G +    F L T + +L L NNQFTGT++ 
Sbjct: 258 STNSFSGEVPKQLLATKDLWILKLSNNKFHGEIFSRDFNL-TGLRYLYLGNNQFTGTLSN 316

Query: 170 -IPDYRYLERFDVSQNHLSGRISTF-GNWTMLTFLILRDNLFDGPIPLEPYLLPNLQF 3
            I    +L   DVS N++SG I  + GN T LT L+L +N F G +P E   L +L+F
Sbjct: 317 VISRSSWLWELDVSNNYMSGEIPNWIGNMTYLTTLVLGNNSFKGKLPPEISQLQSLEF 374


>ref|XP_003632830.1| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like
           [Vitis vinifera]
          Length = 1062

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 51/118 (43%), Positives = 67/118 (56%), Gaps = 6/118 (5%)
 Frame = -2

Query: 338 SDNSFSGEIPHNFVINSPTSFIRLSNNKLSGPL---SFLLNTSVSHLELNNNQFTGTIT- 171
           S N+FSGE+P   +      +++LSNNK  G +    F L T +S L L NNQ TGT++ 
Sbjct: 614 STNNFSGEVPKQLLAAKDLGYLKLSNNKFHGEIFSRDFNL-TGLSCLYLGNNQLTGTLSN 672

Query: 170 -IPDYRYLERFDVSQNHLSGRI-STFGNWTMLTFLILRDNLFDGPIPLEPYLLPNLQF 3
            I     LE  DVS N++SG I S  GN T LT L+L +N F G +P E   L  L+F
Sbjct: 673 VISISSELEVLDVSNNYMSGEIPSQIGNMTYLTTLVLGNNSFKGKLPPEISQLWGLEF 730


>ref|XP_003632819.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g36180-like [Vitis vinifera]
          Length = 918

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 51/118 (43%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
 Frame = -2

Query: 338 SDNSFSGEIPHNFVINSPTSFIRLSNNKLSGPL---SFLLNTSVSHLELNNNQFTGTIT- 171
           S N+FSGE+P   +       ++LSNNK  G +    F L T V  L L NNQFTGT++ 
Sbjct: 419 SANNFSGEVPKQLLATKRLEILKLSNNKFHGEIFSRDFNL-TWVEVLCLGNNQFTGTLSN 477

Query: 170 -IPDYRYLERFDVSQNHLSGRI-STFGNWTMLTFLILRDNLFDGPIPLEPYLLPNLQF 3
            I    +L   DVS N++SG I S  GN T LT L+L +N F G +P E   L  L+F
Sbjct: 478 VISKNSWLSVLDVSNNYMSGEIPSQIGNMTDLTTLVLGNNSFKGKLPPEISQLQGLEF 535


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