BLASTX nr result

ID: Coptis23_contig00040839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040839
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512605.1| conserved hypothetical protein [Ricinus comm...   241   6e-62
emb|CBI28687.3| unnamed protein product [Vitis vinifera]              237   6e-61
ref|XP_001763240.1| predicted protein [Physcomitrella patens sub...   209   2e-52
ref|XP_001782633.1| predicted protein [Physcomitrella patens sub...   209   2e-52
ref|XP_002986548.1| hypothetical protein SELMODRAFT_41669 [Selag...   209   2e-52

>ref|XP_002512605.1| conserved hypothetical protein [Ricinus communis]
           gi|223548566|gb|EEF50057.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 815

 Score =  241 bits (614), Expect = 6e-62
 Identities = 116/141 (82%), Positives = 124/141 (87%)
 Frame = -3

Query: 424 WLLVYEFACNESLDSHLYNSRGTGGQEVMTWKNRMKVAIGTARGLRYLHEDCRVGCIIHR 245
           WLL+YEFACN SLD HLY   G    +V+ W NRMKVA+GTARGLRYLHEDCRVGCI+HR
Sbjct: 497 WLLIYEFACNGSLDKHLY---GNETNKVLAWDNRMKVAVGTARGLRYLHEDCRVGCIVHR 553

Query: 244 DLRPKNILLTHDFEPMVGDFGLARLQSDGQSAEETRVIGAFGYLAPEYTQTGLITAKADV 65
           D RP NIL+THDFEPMVGDFGLAR Q+DGQ AEETRVIGAFGYLAPEYTQTGLIT KADV
Sbjct: 554 DFRPSNILVTHDFEPMVGDFGLARWQADGQRAEETRVIGAFGYLAPEYTQTGLITEKADV 613

Query: 64  YAFGVVLLELLSGLKATDLSR 2
           YAFGVVLLELLSG+KATD SR
Sbjct: 614 YAFGVVLLELLSGIKATDFSR 634


>emb|CBI28687.3| unnamed protein product [Vitis vinifera]
          Length = 736

 Score =  237 bits (605), Expect = 6e-61
 Identities = 116/141 (82%), Positives = 125/141 (88%)
 Frame = -3

Query: 424 WLLVYEFACNESLDSHLYNSRGTGGQEVMTWKNRMKVAIGTARGLRYLHEDCRVGCIIHR 245
           W+LVYEFACN SLD HLY   G   Q +M+W +RMKVA+G ARGLRYLHEDCRVGCI+HR
Sbjct: 564 WILVYEFACNGSLDKHLY---GELKQHLMSWDSRMKVALGAARGLRYLHEDCRVGCIVHR 620

Query: 244 DLRPKNILLTHDFEPMVGDFGLARLQSDGQSAEETRVIGAFGYLAPEYTQTGLITAKADV 65
           D RP NILLTHDFEPMVGDFGLAR Q+DGQ+AEETRVIGAFGYLAPEYTQTGLIT KADV
Sbjct: 621 DFRPTNILLTHDFEPMVGDFGLARWQADGQTAEETRVIGAFGYLAPEYTQTGLITEKADV 680

Query: 64  YAFGVVLLELLSGLKATDLSR 2
           YAFGVVLLELLSG KAT+LSR
Sbjct: 681 YAFGVVLLELLSGCKATELSR 701



 Score =  122 bits (307), Expect = 2e-26
 Identities = 63/140 (45%), Positives = 90/140 (64%)
 Frame = -3

Query: 421 LLVYEFACNESLDSHLYNSRGTGGQEVMTWKNRMKVAIGTARGLRYLHEDCRVGCIIHRD 242
           LLV E+    SL  HL+  +    QE ++W  RM +A+G ARG+ YLHE      +++RD
Sbjct: 152 LLVCEYMSLGSLVDHLFEMKPD--QEPLSWPTRMNLALGAARGVEYLHEKANPP-VLYRD 208

Query: 241 LRPKNILLTHDFEPMVGDFGLARLQSDGQSAEETRVIGAFGYLAPEYTQTGLITAKADVY 62
           L+  NILL  DF P +  FGL + +S G   + +RV+G +GY APEY++    T K+D+Y
Sbjct: 209 LKSSNILLCGDFHPKLSTFGLGKAKSVGDKMQVSRVMGTYGYCAPEYSRDSQFTLKSDIY 268

Query: 61  AFGVVLLELLSGLKATDLSR 2
           +FGVVLLEL++G KA D +R
Sbjct: 269 SFGVVLLELITGRKAIDTTR 288


>ref|XP_001763240.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162685723|gb|EDQ72117.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 798

 Score =  209 bits (532), Expect = 2e-52
 Identities = 102/140 (72%), Positives = 113/140 (80%)
 Frame = -3

Query: 421 LLVYEFACNESLDSHLYNSRGTGGQEVMTWKNRMKVAIGTARGLRYLHEDCRVGCIIHRD 242
           LLVYEF CN SLD HLY       + V+ W +R K+A+GTARGLRYLHEDCRVGCI+HRD
Sbjct: 463 LLVYEFICNGSLDGHLYER----DRPVLEWNSRHKIAVGTARGLRYLHEDCRVGCIVHRD 518

Query: 241 LRPKNILLTHDFEPMVGDFGLARLQSDGQSAEETRVIGAFGYLAPEYTQTGLITAKADVY 62
           LRP NILLTHDFEPMVGDFGLAR Q DG    ETRVIG FGYLAPEYTQ G IT KADVY
Sbjct: 519 LRPNNILLTHDFEPMVGDFGLARWQPDGHCGVETRVIGTFGYLAPEYTQHGQITDKADVY 578

Query: 61  AFGVVLLELLSGLKATDLSR 2
           +FGVVLLEL++G KA D++R
Sbjct: 579 SFGVVLLELITGRKAIDINR 598


>ref|XP_001782633.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162665866|gb|EDQ52536.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 787

 Score =  209 bits (532), Expect = 2e-52
 Identities = 102/140 (72%), Positives = 113/140 (80%)
 Frame = -3

Query: 421 LLVYEFACNESLDSHLYNSRGTGGQEVMTWKNRMKVAIGTARGLRYLHEDCRVGCIIHRD 242
           LLVYEF CN SLD HLY       + V+ W +R K+A+GTARGLRYLHEDCRVGCI+HRD
Sbjct: 452 LLVYEFICNGSLDGHLYER----DRPVLEWSSRHKIAVGTARGLRYLHEDCRVGCIVHRD 507

Query: 241 LRPKNILLTHDFEPMVGDFGLARLQSDGQSAEETRVIGAFGYLAPEYTQTGLITAKADVY 62
           LRP NILLTHDFEPMVGDFGLAR Q DG    ETRVIG FGYLAPEYTQ G IT KADVY
Sbjct: 508 LRPNNILLTHDFEPMVGDFGLARWQPDGHCGVETRVIGTFGYLAPEYTQHGQITDKADVY 567

Query: 61  AFGVVLLELLSGLKATDLSR 2
           +FGVVLLEL++G KA D++R
Sbjct: 568 SFGVVLLELITGRKAIDINR 587


>ref|XP_002986548.1| hypothetical protein SELMODRAFT_41669 [Selaginella moellendorffii]
           gi|300145731|gb|EFJ12405.1| hypothetical protein
           SELMODRAFT_41669 [Selaginella moellendorffii]
          Length = 606

 Score =  209 bits (531), Expect = 2e-52
 Identities = 102/140 (72%), Positives = 113/140 (80%)
 Frame = -3

Query: 421 LLVYEFACNESLDSHLYNSRGTGGQEVMTWKNRMKVAIGTARGLRYLHEDCRVGCIIHRD 242
           LLVYEF CN SLDSHLY  R       + W  R K+A+G AR LRYLHE+CRVGCI+HRD
Sbjct: 399 LLVYEFVCNGSLDSHLYGRRSK--TVTLEWPARQKIALGAARALRYLHEECRVGCIVHRD 456

Query: 241 LRPKNILLTHDFEPMVGDFGLARLQSDGQSAEETRVIGAFGYLAPEYTQTGLITAKADVY 62
           +RP NILLTHDFEPMVGDFGLAR Q +G+   ETRVIGAFGYLAPEYTQTG IT KADVY
Sbjct: 457 VRPNNILLTHDFEPMVGDFGLARWQPNGELGVETRVIGAFGYLAPEYTQTGQITEKADVY 516

Query: 61  AFGVVLLELLSGLKATDLSR 2
           +FG+VLLEL+SG KA DLSR
Sbjct: 517 SFGIVLLELVSGRKAVDLSR 536


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