BLASTX nr result

ID: Coptis23_contig00040788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040788
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_06710336.1| hypothetical protein SSTG_03777 [Streptomyces...    64   2e-08
ref|ZP_07312206.1| hypothetical protein SSRG_03379 [Streptomyces...    63   2e-08
ref|ZP_07273396.1| conserved hypothetical protein [Streptomyces ...    52   6e-08
ref|ZP_06706815.1| hypothetical protein SSTG_00255 [Streptomyces...    60   2e-07
ref|ZP_08152177.1| hypothetical protein HMPREF0490_02918, partia...    56   3e-06

>ref|ZP_06710336.1| hypothetical protein SSTG_03777 [Streptomyces sp. e14]
           gi|292835109|gb|EFF93458.1| hypothetical protein
           SSTG_03777 [Streptomyces sp. e14]
          Length = 86

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/73 (50%), Positives = 47/73 (64%)
 Frame = +2

Query: 44  VWGITLSGPLKIIALVSRYLTN*LILRVPISIRRSFQY*TMPFNILWSINLPFERLSPR* 223
           +W + LSG L ++ALVSRYLTN LI R  I  RRSF    MP+ ++  I   F+ LS   
Sbjct: 1   MWPVALSGRLPVVALVSRYLTNKLIGRGLILHRRSFPASKMPWRLVSGIRPRFQGLSQSE 60

Query: 224 RQVAHVLRTRTPL 262
            Q+AHVL TR+PL
Sbjct: 61  GQIAHVLLTRSPL 73


>ref|ZP_07312206.1| hypothetical protein SSRG_03379 [Streptomyces griseoflavus Tu4000]
           gi|302477482|gb|EFL40575.1| hypothetical protein
           SSRG_03379 [Streptomyces griseoflavus Tu4000]
          Length = 86

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/73 (50%), Positives = 46/73 (63%)
 Frame = +2

Query: 44  VWGITLSGPLKIIALVSRYLTN*LILRVPISIRRSFQY*TMPFNILWSINLPFERLSPR* 223
           +W + LSG L ++ALVS YLTN LI R  I  RRSFQ   MP  ++  I   F+ LS   
Sbjct: 1   MWPVALSGRLPVVALVSHYLTNKLIGRGLILHRRSFQPLQMPAGVISGIRPRFQGLSQSE 60

Query: 224 RQVAHVLRTRTPL 262
            Q+AHVL TR+PL
Sbjct: 61  GQIAHVLLTRSPL 73


>ref|ZP_07273396.1| conserved hypothetical protein [Streptomyces sp. SPB78]
           gi|302429949|gb|EFL01765.1| conserved hypothetical
           protein [Streptomyces sp. SPB78]
          Length = 69

 Score = 52.0 bits (123), Expect(2) = 6e-08
 Identities = 25/37 (67%), Positives = 26/37 (70%)
 Frame = +1

Query: 58  PLRPPKDHRLGEPLPHQLANLARAHLYPPELSILNDA 168
           PLRP    RLGEPLPHQLA+  RAH  PPELS   DA
Sbjct: 2   PLRPATRRRLGEPLPHQLADRPRAHPAPPELSTAKDA 38



 Score = 29.6 bits (65), Expect(2) = 6e-08
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +3

Query: 180 YGVLIFLSKGYPPDKGRLHTCYAPVR 257
           Y VL  +S+  P  +GRL TCY+PVR
Sbjct: 43  YPVLDPVSRACPRVQGRLPTCYSPVR 68


>ref|ZP_06706815.1| hypothetical protein SSTG_00255 [Streptomyces sp. e14]
           gi|292831588|gb|EFF89937.1| hypothetical protein
           SSTG_00255 [Streptomyces sp. e14]
          Length = 86

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/73 (49%), Positives = 45/73 (61%)
 Frame = +2

Query: 44  VWGITLSGPLKIIALVSRYLTN*LILRVPISIRRSFQY*TMPFNILWSINLPFERLSPR* 223
           +W + LSG L ++ALVS YLTN LI R  I  RRSF    MP  ++  I   F+ LS   
Sbjct: 1   MWPVALSGRLPVVALVSHYLTNKLIGRGLILHRRSFPASKMPRRLVSGIRPRFQGLSQSE 60

Query: 224 RQVAHVLRTRTPL 262
            Q+AHVL TR+PL
Sbjct: 61  GQIAHVLLTRSPL 73


>ref|ZP_08152177.1| hypothetical protein HMPREF0490_02918, partial [Lachnospiraceae
           bacterium 4_1_37FAA] gi|325470109|gb|EGC73343.1|
           hypothetical protein HMPREF0490_02918 [Lachnospiraceae
           bacterium 4_1_37FAA]
          Length = 58

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/39 (64%), Positives = 27/39 (69%)
 Frame = +1

Query: 55  HPLRPPKDHRLGEPLPHQLANLARAHLYPPELSILNDAV 171
           HPLRP  D RLG PLPHQLAN  R HL PPE   L+ A+
Sbjct: 3   HPLRPATDRRLGGPLPHQLANQTRVHLIPPEFFTLDHAI 41


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