BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040781
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36352.3| unnamed protein product [Vitis vinifera]              171   7e-41
ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat...   171   7e-41
ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat...   160   1e-37
ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   157   6e-37
ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat...   155   3e-36

>emb|CBI36352.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score =  171 bits (432), Expect = 7e-41
 Identities = 81/111 (72%), Positives = 96/111 (86%)
 Frame = +3

Query: 3   ERTAKRLVELEPESGAVYVLLSNIYAACNRLHDVRSIRKMMMDKGIKKTPGCSSIEVNGA 182
           E  A++++ELEPE+GAVYVLL NIYAACNR   +  +RK+MMD+GIKKTPGCS IE+NG+
Sbjct: 422 EMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGS 481

Query: 183 IHEFVAGDRGHSCSDEIYSKLDEMTQDLKFAGYVPDTSEVFLDVGEEEKES 335
           +HEFVAGD+ H  S EIYSKLDEM+ DLKFAGY PDTSEVFLD+GEEEKES
Sbjct: 482 VHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKES 532


>ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  171 bits (432), Expect = 7e-41
 Identities = 81/111 (72%), Positives = 96/111 (86%)
 Frame = +3

Query: 3   ERTAKRLVELEPESGAVYVLLSNIYAACNRLHDVRSIRKMMMDKGIKKTPGCSSIEVNGA 182
           E  A++++ELEPE+GAVYVLL NIYAACNR   +  +RK+MMD+GIKKTPGCS IE+NG+
Sbjct: 541 EMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGS 600

Query: 183 IHEFVAGDRGHSCSDEIYSKLDEMTQDLKFAGYVPDTSEVFLDVGEEEKES 335
           +HEFVAGD+ H  S EIYSKLDEM+ DLKFAGY PDTSEVFLD+GEEEKES
Sbjct: 601 VHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKES 651


>ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  160 bits (404), Expect = 1e-37
 Identities = 75/111 (67%), Positives = 92/111 (82%)
 Frame = +3

Query: 3   ERTAKRLVELEPESGAVYVLLSNIYAACNRLHDVRSIRKMMMDKGIKKTPGCSSIEVNGA 182
           E   K+++ELEP++GAVYVLL NIYAAC R +D+R +R+MMMDKGIKKTPGCS IE+NG 
Sbjct: 540 EMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGR 599

Query: 183 IHEFVAGDRGHSCSDEIYSKLDEMTQDLKFAGYVPDTSEVFLDVGEEEKES 335
           +HEFVAGDR H  +  I +KLD+MTQDLK AGY PD SEVFLD+ EE+KE+
Sbjct: 600 VHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKEN 650


>ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  157 bits (398), Expect = 6e-37
 Identities = 74/111 (66%), Positives = 91/111 (81%)
 Frame = +3

Query: 3   ERTAKRLVELEPESGAVYVLLSNIYAACNRLHDVRSIRKMMMDKGIKKTPGCSSIEVNGA 182
           E   K+++ELEP++GAVYVLL NIYAAC R +D+R +R+MMMDKGIKK PGCS IE+NG 
Sbjct: 561 EMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGR 620

Query: 183 IHEFVAGDRGHSCSDEIYSKLDEMTQDLKFAGYVPDTSEVFLDVGEEEKES 335
           +HEFVAGDR H  +  I +KLD+MTQDLK AGY PD SEVFLD+ EE+KE+
Sbjct: 621 VHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKEN 671


>ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  155 bits (392), Expect = 3e-36
 Identities = 73/111 (65%), Positives = 93/111 (83%)
 Frame = +3

Query: 3   ERTAKRLVELEPESGAVYVLLSNIYAACNRLHDVRSIRKMMMDKGIKKTPGCSSIEVNGA 182
           E  AK+++ELEPE+GAVYVLL NIYAAC R  ++R +RK+MM++GIKKTPGCS +E+NG 
Sbjct: 529 EMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGN 588

Query: 183 IHEFVAGDRGHSCSDEIYSKLDEMTQDLKFAGYVPDTSEVFLDVGEEEKES 335
           ++EFVAGD+ H  S EIY+KL+ M QDL  AGY PDTSEVFLD+GEE+KE+
Sbjct: 589 VYEFVAGDQSHPQSKEIYAKLENMMQDLIKAGYSPDTSEVFLDLGEEDKET 639