BLASTX nr result

ID: Coptis23_contig00040769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040769
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_005090358.1| NADH dehydrogenase subunit 2 (mitochondrion)...   143   2e-32
dbj|BAF01671.1| hypothetical protein [Arabidopsis thaliana]           143   2e-32
gb|AFW63414.1| hypothetical protein ZEAMMB73_221912 [Zea mays]        139   2e-31
ref|YP_002608350.1| NADH dehydrogenase subunit 2 [Vitis vinifera...   139   2e-31
gb|AAB87627.1| NADH-dehydrogenase subunit 2 [Panax ginseng]           138   4e-31

>ref|YP_005090358.1| NADH dehydrogenase subunit 2 (mitochondrion) [Phoenix dactylifera]
           gi|343478418|gb|AEM43906.1| NADH dehydrogenase subunit 2
           (mitochondrion) [Phoenix dactylifera]
          Length = 494

 Score =  143 bits (360), Expect = 2e-32
 Identities = 73/75 (97%), Positives = 73/75 (97%)
 Frame = -2

Query: 334 DASESIVLIPLPTRSMLFMIPAHDSIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYL 155
           DASESIVLIPLPTRSML MIPAHDSIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYL
Sbjct: 109 DASESIVLIPLPTRSMLLMIPAHDSIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYL 168

Query: 154 ILGAFPSGILLFGYD 110
           ILGAFPSGILLFG D
Sbjct: 169 ILGAFPSGILLFGCD 183


>dbj|BAF01671.1| hypothetical protein [Arabidopsis thaliana]
          Length = 93

 Score =  143 bits (360), Expect = 2e-32
 Identities = 74/81 (91%), Positives = 74/81 (91%)
 Frame = -2

Query: 334 DASESIVLIPLPTRSMLFMIPAHDSIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYL 155
           DA E IVLIPLPTR MLFMI AHD IAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYL
Sbjct: 12  DAFEFIVLIPLPTRGMLFMISAHDLIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYL 71

Query: 154 ILGAFPSGILLFGYDRTTYDI 92
           ILGAF SGILLFGYDRTT DI
Sbjct: 72  ILGAFSSGILLFGYDRTTTDI 92


>gb|AFW63414.1| hypothetical protein ZEAMMB73_221912 [Zea mays]
          Length = 98

 Score =  139 bits (351), Expect = 2e-31
 Identities = 73/80 (91%), Positives = 73/80 (91%)
 Frame = -2

Query: 334 DASESIVLIPLPTRSMLFMIPAHDSIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYL 155
           DA E IVLIPLPTRSML MIPAHD IAMYLAIE QSLCFYVIAASKRKSEFSTEAGSKYL
Sbjct: 12  DAFEFIVLIPLPTRSMLLMIPAHDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGSKYL 71

Query: 154 ILGAFPSGILLFGYDRTTYD 95
           ILGAFPSGILLFG DRTT D
Sbjct: 72  ILGAFPSGILLFGCDRTTTD 91


>ref|YP_002608350.1| NADH dehydrogenase subunit 2 [Vitis vinifera]
           gi|209954146|emb|CAQ77578.1| NADH dehydrogenase subunit
           2 [Vitis vinifera]
          Length = 488

 Score =  139 bits (350), Expect = 2e-31
 Identities = 71/73 (97%), Positives = 71/73 (97%)
 Frame = -2

Query: 334 DASESIVLIPLPTRSMLFMIPAHDSIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYL 155
           DASESIVLIPLPTRSMLFMI AHDSIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYL
Sbjct: 110 DASESIVLIPLPTRSMLFMISAHDSIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYL 169

Query: 154 ILGAFPSGILLFG 116
           ILGAFPSGI LFG
Sbjct: 170 ILGAFPSGIFLFG 182


>gb|AAB87627.1| NADH-dehydrogenase subunit 2 [Panax ginseng]
          Length = 235

 Score =  138 bits (348), Expect = 4e-31
 Identities = 71/73 (97%), Positives = 72/73 (98%)
 Frame = -2

Query: 334 DASESIVLIPLPTRSMLFMIPAHDSIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYL 155
           DASESIVLIPLPTRSMLFMI A+DSIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYL
Sbjct: 110 DASESIVLIPLPTRSMLFMISAYDSIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYL 169

Query: 154 ILGAFPSGILLFG 116
           ILGAFPSGILLFG
Sbjct: 170 ILGAFPSGILLFG 182


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