BLASTX nr result

ID: Coptis23_contig00040758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040758
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32533.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07

>emb|CBI32533.3| unnamed protein product [Vitis vinifera]
          Length = 299

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/44 (56%), Positives = 36/44 (81%)
 Frame = -1

Query: 245 MVGKGFEPSVEIYNCFISGYSRQGNEELSRNLRKEMVDFGLKQE 114
           MVGKGF+P++EIY+ FI GY +QGN+E++  LRKEM +  ++QE
Sbjct: 254 MVGKGFKPTLEIYSAFIDGYMKQGNKEIAETLRKEMFETQMQQE 297


>ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Vitis vinifera]
          Length = 492

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/44 (56%), Positives = 36/44 (81%)
 Frame = -1

Query: 245 MVGKGFEPSVEIYNCFISGYSRQGNEELSRNLRKEMVDFGLKQE 114
           MVGKGF+P++EIY+ FI GY +QGN+E++  LRKEM +  ++QE
Sbjct: 447 MVGKGFKPTLEIYSAFIDGYMKQGNKEIAETLRKEMFETQMQQE 490


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