BLASTX nr result

ID: Coptis23_contig00040739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040739
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282620.1| PREDICTED: probable LRR receptor-like serine...    92   4e-17
emb|CBI21029.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002309617.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002527912.1| serine-threonine protein kinase, plant-type,...    68   7e-10
emb|CBI23374.3| unnamed protein product [Vitis vinifera]               67   2e-09

>ref|XP_002282620.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g51810-like [Vitis vinifera]
          Length = 593

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/67 (67%), Positives = 56/67 (83%)
 Frame = +2

Query: 35  KTKQSELSVFSSVKSTIFSYNEVCDATSNFSVSQMIGQGAYGSVYLGHLKGIEVAIKQMK 214
           ++++S  S F+  K+T+FSY EVCDAT NFS+S  IGQG+YGSVYLG L+GI+VAIKQMK
Sbjct: 267 ESEESMASSFNLDKATVFSYIEVCDATCNFSMSLKIGQGSYGSVYLGKLRGIDVAIKQMK 326

Query: 215 NTKSKEF 235
            TKSKEF
Sbjct: 327 ETKSKEF 333


>emb|CBI21029.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/60 (73%), Positives = 51/60 (85%)
 Frame = +2

Query: 56  SVFSSVKSTIFSYNEVCDATSNFSVSQMIGQGAYGSVYLGHLKGIEVAIKQMKNTKSKEF 235
           S F+  K+T+FSY EVCDAT NFS+S  IGQG+YGSVYLG L+GI+VAIKQMK TKSKEF
Sbjct: 3   SSFNLDKATVFSYIEVCDATCNFSMSLKIGQGSYGSVYLGKLRGIDVAIKQMKETKSKEF 62


>ref|XP_002309617.1| predicted protein [Populus trichocarpa] gi|222855593|gb|EEE93140.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/62 (62%), Positives = 49/62 (79%)
 Frame = +2

Query: 53  LSVFSSVKSTIFSYNEVCDATSNFSVSQMIGQGAYGSVYLGHLKGIEVAIKQMKNTKSKE 232
           +S   S K+T+  YNE+ +ATSNFS S +IGQG+YG VYLG L+G +VAIKQMK+T SKE
Sbjct: 2   VSSIGSDKATVLPYNEIREATSNFSRSLIIGQGSYGLVYLGKLRGTDVAIKQMKDTNSKE 61

Query: 233 FL 238
           FL
Sbjct: 62  FL 63


>ref|XP_002527912.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223532687|gb|EEF34469.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 623

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/60 (56%), Positives = 42/60 (70%)
 Frame = +2

Query: 56  SVFSSVKSTIFSYNEVCDATSNFSVSQMIGQGAYGSVYLGHLKGIEVAIKQMKNTKSKEF 235
           + F S K  I+S  E+ +AT+NF  S+ IG G YGSVY G L G EVAIK+MK+ KSKEF
Sbjct: 297 TAFESEKPVIYSPEEIEEATNNFDESRKIGAGGYGSVYFGELAGQEVAIKKMKSNKSKEF 356


>emb|CBI23374.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/66 (51%), Positives = 44/66 (66%)
 Frame = +2

Query: 38  TKQSELSVFSSVKSTIFSYNEVCDATSNFSVSQMIGQGAYGSVYLGHLKGIEVAIKQMKN 217
           +K  E   F S +  IFS  E+ DAT+NF  ++ IG+G YGSVY G L   EVAIK+M++
Sbjct: 218 SKDKEGECFESERPVIFSLEEIEDATNNFDETRKIGEGGYGSVYFGVLGEQEVAIKKMRS 277

Query: 218 TKSKEF 235
            KSKEF
Sbjct: 278 NKSKEF 283


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