BLASTX nr result

ID: Coptis23_contig00040735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040735
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002446307.1| hypothetical protein SORBIDRAFT_06g013940 [S...    68   7e-10
ref|NP_001169698.1| hypothetical protein [Zea mays] gi|224031001...    68   7e-10
gb|AFW58072.1| hypothetical protein ZEAMMB73_255234 [Zea mays] g...    67   1e-09
gb|ACN35332.1| unknown [Zea mays]                                      67   1e-09
ref|NP_001169948.1| uncharacterized protein LOC100383847 [Zea ma...    67   1e-09

>ref|XP_002446307.1| hypothetical protein SORBIDRAFT_06g013940 [Sorghum bicolor]
            gi|241937490|gb|EES10635.1| hypothetical protein
            SORBIDRAFT_06g013940 [Sorghum bicolor]
          Length = 1025

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/38 (84%), Positives = 36/38 (94%)
 Frame = +2

Query: 2    VGRAPSAATATGFSQVHVKEQTELVQKALKQDPINYPW 115
            VGRAPSAATATGF  VHV+EQTELVQKAL++DPINYP+
Sbjct: 988  VGRAPSAATATGFYSVHVQEQTELVQKALQRDPINYPF 1025


>ref|NP_001169698.1| hypothetical protein [Zea mays] gi|224031001|gb|ACN34576.1| unknown
            [Zea mays] gi|414587574|tpg|DAA38145.1| TPA: hypothetical
            protein ZEAMMB73_516904 [Zea mays]
            gi|414587575|tpg|DAA38146.1| TPA: hypothetical protein
            ZEAMMB73_516904 [Zea mays]
          Length = 1025

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/38 (84%), Positives = 36/38 (94%)
 Frame = +2

Query: 2    VGRAPSAATATGFSQVHVKEQTELVQKALKQDPINYPW 115
            VGRAPSAATATGF  VHV+EQTELVQKAL++DPINYP+
Sbjct: 988  VGRAPSAATATGFYSVHVQEQTELVQKALQRDPINYPF 1025


>gb|AFW58072.1| hypothetical protein ZEAMMB73_255234 [Zea mays]
            gi|413918141|gb|AFW58073.1| hypothetical protein
            ZEAMMB73_255234 [Zea mays]
          Length = 1025

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/38 (81%), Positives = 36/38 (94%)
 Frame = +2

Query: 2    VGRAPSAATATGFSQVHVKEQTELVQKALKQDPINYPW 115
            VGRAPSAATATGF  VHV+EQTELVQKAL++DP+NYP+
Sbjct: 988  VGRAPSAATATGFYSVHVQEQTELVQKALQRDPLNYPF 1025


>gb|ACN35332.1| unknown [Zea mays]
          Length = 302

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/38 (81%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   VGRAPSAATATGFSQVHVKEQTELVQKALKQDPINYPW 115
           VGRAPSAATATGF  VHV+EQTELVQKAL++DP+NYP+
Sbjct: 265 VGRAPSAATATGFYSVHVQEQTELVQKALQRDPLNYPF 302


>ref|NP_001169948.1| uncharacterized protein LOC100383847 [Zea mays]
           gi|223975763|gb|ACN32069.1| unknown [Zea mays]
          Length = 416

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/38 (81%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   VGRAPSAATATGFSQVHVKEQTELVQKALKQDPINYPW 115
           VGRAPSAATATGF  VHV+EQTELVQKAL++DP+NYP+
Sbjct: 379 VGRAPSAATATGFYSVHVQEQTELVQKALQRDPLNYPF 416


Top