BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040733
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149312.1| PREDICTED: (-)-germacrene D synthase-like [C...   169   2e-40
ref|XP_003588311.1| NADH-ubiquinone oxidoreductase chain [Medica...   119   3e-40
ref|XP_003588406.1| hypothetical protein MTR_1g006900 [Medicago ...   100   4e-31
ref|XP_003588331.1| NADH-ubiquinone oxidoreductase chain [Medica...    78   1e-28
emb|CAA39309.1| unnamed protein product [Beta vulgaris subsp. vu...    81   8e-14

>ref|XP_004149312.1| PREDICTED: (-)-germacrene D synthase-like [Cucumis sativus]
          Length = 828

 Score =  169 bits (428), Expect = 2e-40
 Identities = 89/123 (72%), Positives = 93/123 (75%), Gaps = 1/123 (0%)
 Frame = +1

Query: 1   VLSGSGRLVHGPLDGRCKARNWNTLIPLVPVLRFRACPSVWSVLHTVGQQSLHLFTNYDG 180
           VLSGSGRLVHGPLDGRCKARN NTLIPLVPVLRFRACPSVWSVLHTVGQ+SLHLFTNY+G
Sbjct: 345 VLSGSGRLVHGPLDGRCKARNLNTLIPLVPVLRFRACPSVWSVLHTVGQRSLHLFTNYEG 404

Query: 181 SPGPLSSSLFCSLVGVRTPTKGEGVD*TSQPLAGISPASDPQFLFTP-DDRVG*IVTSYD 357
           SPGPLSSSLFCSLVG   P +G              P   P     P D R+G IVTSYD
Sbjct: 405 SPGPLSSSLFCSLVGSGPPQRGRESTEHLSHWREFRPHPIPNSCSPPIDSRLGFIVTSYD 464

Query: 358 RVG 366
           RVG
Sbjct: 465 RVG 467


>ref|XP_003588311.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477359|gb|AES58562.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 548

 Score =  119 bits (299), Expect(2) = 3e-40
 Identities = 53/56 (94%), Positives = 55/56 (98%)
 Frame = -2

Query: 170 LVNKCKLCCPTVWSTDHTEGQALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER 3
           ++NKCKL CPTVWSTDHTEGQALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER
Sbjct: 415 VINKCKLRCPTVWSTDHTEGQALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER 470



 Score = 70.5 bits (171), Expect(2) = 3e-40
 Identities = 34/57 (59%), Positives = 39/57 (68%), Gaps = 12/57 (21%)
 Frame = -1

Query: 357 IVRGHNSP------------NTIIRGEQELGIGCGRNSRQWLRCSVDSLPLCGGPDP 223
           I+R H++P             ++  G  ELGIGCGRNSRQWLRCSVDSLPLCGGPDP
Sbjct: 356 ILRCHDAPIPMAIPLILLALGSLFVGYLELGIGCGRNSRQWLRCSVDSLPLCGGPDP 412


>ref|XP_003588406.1| hypothetical protein MTR_1g006900 [Medicago truncatula]
           gi|355477454|gb|AES58657.1| hypothetical protein
           MTR_1g006900 [Medicago truncatula]
          Length = 160

 Score =  100 bits (248), Expect(2) = 4e-31
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = -2

Query: 137 VWSTDHTEGQALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER 3
           VWSTDHTEGQALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER
Sbjct: 38  VWSTDHTEGQALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER 82



 Score = 59.7 bits (143), Expect(2) = 4e-31
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = -3

Query: 295 MRAKFPPMAEMFSRLPPPLWGSGPLRVSRK 206
           MRAKFPPMAEMFSRLPPPLWGSGPL   +K
Sbjct: 1   MRAKFPPMAEMFSRLPPPLWGSGPLTSEQK 30


>ref|XP_003588331.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477379|gb|AES58582.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 569

 Score = 77.8 bits (190), Expect(2) = 1e-28
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = -2

Query: 110 QALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER 3
           +ALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER
Sbjct: 456 RALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER 491



 Score = 73.6 bits (179), Expect(2) = 1e-28
 Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 12/67 (17%)
 Frame = -1

Query: 357 IVRGHNSP------------NTIIRGEQELGIGCGRNSRQWLRCSVDSLPLCGGPDPYE* 214
           I+R H++P             ++  G  ELGIGCGRNSRQWLRCSVDSLPLCGGPDP   
Sbjct: 377 ILRCHDAPIPMAIPLILLALGSLFVGYLELGIGCGRNSRQWLRCSVDSLPLCGGPDPLRV 436

Query: 213 AEKGGGK 193
           + KG  K
Sbjct: 437 SRKGRRK 443


>emb|CAA39309.1| unnamed protein product [Beta vulgaris subsp. vulgaris]
          Length = 90

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = -3

Query: 100 SEGRERAESMCSNFWPCTDHPMDHGLNGHCLKG 2
           SEGRERAESMCSNFWPCTDHPMDHGLNGHCLKG
Sbjct: 1   SEGRERAESMCSNFWPCTDHPMDHGLNGHCLKG 33