BLASTX nr result

ID: Coptis23_contig00040725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040725
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21466.3| unnamed protein product [Vitis vinifera]              136   2e-30
emb|CBJ21246.1| MADS2 protein [Aristolochia fimbriata]                121   5e-26
emb|CAX16992.1| AGL66 protein [Eschscholzia californica]              117   8e-25
emb|CAX32464.1| MADS-box protein agl66, partial [Eschscholzia ca...   115   4e-24
ref|XP_003544182.1| PREDICTED: MADS-box transcription factor 1 [...   111   7e-23

>emb|CBI21466.3| unnamed protein product [Vitis vinifera]
          Length = 338

 Score =  136 bits (342), Expect = 2e-30
 Identities = 65/115 (56%), Positives = 87/115 (75%), Gaps = 1/115 (0%)
 Frame = -3

Query: 344 ELDSCEKQLVEVLTRVGQRKNYLLSNHLSSYDPSSLQMYLDTQEEMATSTENKDVNWFPE 165
           EL+SCEK L+E L RV +RK YLLSNHLS+YDP+S+Q YLD+QE + TS EN+ + W PE
Sbjct: 151 ELESCEKNLLEALNRVTERKKYLLSNHLSTYDPASIQAYLDSQEGLPTSFENEVMGWLPE 210

Query: 164 NAQHQNQIFVGSNPLIPLRD-PSMTMFDSLSQGTNLHVDPRNMGPCQISNQGDQG 3
           N  +  Q+F GS+P +PLR+ PS  ++D+L  GT+++VDP NMG C ISN G +G
Sbjct: 211 NGHNHTQMF-GSDPCVPLRNHPSTNVYDNLGHGTSINVDPINMGGCHISNSGCEG 264


>emb|CBJ21246.1| MADS2 protein [Aristolochia fimbriata]
          Length = 335

 Score =  121 bits (304), Expect = 5e-26
 Identities = 63/116 (54%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
 Frame = -3

Query: 350 IDELDSCEKQLVEVLTRVGQRKNYLLSNHLSSYDPSSLQMYLDTQEEMATSTENKDVNWF 171
           ++E D  EK LV+ LTRV QRK +LLSNHL SYDPSS+ +YLD+QE +A S E++  NW 
Sbjct: 149 MEEFDDSEKFLVDALTRVTQRKKFLLSNHLPSYDPSSIPVYLDSQEGLAPSFESEVANWL 208

Query: 170 P-ENAQHQNQIFVGSNPLIPLRDPSMTMFDSLSQGTNLHVDPRNMGPCQISNQGDQ 6
           P +NA +  QI+VGS+PLI LRD   +++D LS    L VDP  MG C ISN  D+
Sbjct: 209 PDQNAPNPGQIYVGSDPLIHLRDQQSSVYDPLSHPEGLQVDP-TMGECHISNSSDR 263


>emb|CAX16992.1| AGL66 protein [Eschscholzia californica]
          Length = 348

 Score =  117 bits (294), Expect = 8e-25
 Identities = 58/113 (51%), Positives = 82/113 (72%), Gaps = 3/113 (2%)
 Frame = -3

Query: 344 ELDSCEKQLVEVLTRVGQRKNYLLSNH-LSSYDPSSLQMYLDTQEEM-ATSTENKDVNWF 171
           +++SCEK L + LTR+ +RK YLLSN  ++SYDPS +QMY+D QE M +TS  N+ VNW 
Sbjct: 151 DIESCEKNLFDTLTRITERKKYLLSNQQIASYDPSDIQMYMDPQEGMGSTSFRNEVVNWM 210

Query: 170 PENAQHQNQIFVGSNPLIPLRDPSMTMF-DSLSQGTNLHVDPRNMGPCQISNQ 15
           P++  + NQI+V S+ L PLRD    MF + L  G++L+VDPR+MG C ++NQ
Sbjct: 211 PDHQHNPNQIYVESHSLSPLRDHQSNMFHEQLQHGSSLNVDPRSMGECHVNNQ 263


>emb|CAX32464.1| MADS-box protein agl66, partial [Eschscholzia californica]
          Length = 203

 Score =  115 bits (288), Expect = 4e-24
 Identities = 56/113 (49%), Positives = 82/113 (72%), Gaps = 3/113 (2%)
 Frame = -3

Query: 344 ELDSCEKQLVEVLTRVGQRKNYLLSNH-LSSYDPSSLQMYLDTQEEM-ATSTENKDVNWF 171
           +++SCEK L + +TR+ +RK YLLSN  ++SYDPS +QMY+D QE M +TS  N+ VNW 
Sbjct: 6   DIESCEKNLFDTITRITERKKYLLSNQQIASYDPSDIQMYMDPQEGMGSTSFRNEVVNWM 65

Query: 170 PENAQHQNQIFVGSNPLIPLRDPSMTMF-DSLSQGTNLHVDPRNMGPCQISNQ 15
           P++  + NQI+V S+ L PLRD    +F + L  G++L+VDPR+MG C ++NQ
Sbjct: 66  PDHQHNPNQIYVESHSLSPLRDHQSNIFHEQLQHGSSLNVDPRSMGECHVNNQ 118


>ref|XP_003544182.1| PREDICTED: MADS-box transcription factor 1 [Glycine max]
          Length = 347

 Score =  111 bits (277), Expect = 7e-23
 Identities = 61/112 (54%), Positives = 74/112 (66%)
 Frame = -3

Query: 344 ELDSCEKQLVEVLTRVGQRKNYLLSNHLSSYDPSSLQMYLDTQEEMATSTENKDVNWFPE 165
           +L++ EK LV+VLTRV QRK YLLSNHLSSYDPS +Q        + TS EN  V W  +
Sbjct: 183 DLENSEKHLVDVLTRVIQRKEYLLSNHLSSYDPSGIQ-------GIPTSFEN--VGWLQD 233

Query: 164 NAQHQNQIFVGSNPLIPLRDPSMTMFDSLSQGTNLHVDPRNMGPCQISNQGD 9
            +Q+Q QIF  S PL PLRD S TM+ S SQG + + DPR MG C +SN  D
Sbjct: 234 GSQNQAQIFDASAPLDPLRDLSSTMYGSFSQGRSSNADPRGMGECHVSNPSD 285


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