BLASTX nr result

ID: Coptis23_contig00040721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040721
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32505.3| unnamed protein product [Vitis vinifera]              153   1e-35
ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein ...   153   1e-35
ref|XP_002522369.1| conserved hypothetical protein [Ricinus comm...   149   3e-34
ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|NP_001053123.1| Os04g0483200 [Oryza sativa Japonica Group] g...   101   7e-20

>emb|CBI32505.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score =  153 bits (387), Expect = 1e-35
 Identities = 75/105 (71%), Positives = 88/105 (83%), Gaps = 2/105 (1%)
 Frame = -1

Query: 309 TVVGLVGTVIMGIGYAFVWPVMETFRAISKPGV--RNKLLGCLADGTWSNVWGACTIVRD 136
           TVVG+VG+VIMGIGY F+ PVM+TF+A+S  GV  R KL+ C  DGTWSNVWGACTIVRD
Sbjct: 92  TVVGVVGSVIMGIGYGFICPVMDTFKAVSMEGVSLRTKLIRCFTDGTWSNVWGACTIVRD 151

Query: 135 FGDFSFHSYFSVMDELLEAKEDEKRIELKVSQVPGCIVSAVLGVV 1
           F DFSFHSYFSVMD LLE+K  EK IELKV ++PGCI+ A+LGV+
Sbjct: 152 FADFSFHSYFSVMDGLLESK-GEKPIELKVFEIPGCILCAILGVL 195


>ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Vitis
           vinifera]
          Length = 547

 Score =  153 bits (387), Expect = 1e-35
 Identities = 75/105 (71%), Positives = 88/105 (83%), Gaps = 2/105 (1%)
 Frame = -1

Query: 309 TVVGLVGTVIMGIGYAFVWPVMETFRAISKPGV--RNKLLGCLADGTWSNVWGACTIVRD 136
           TVVG+VG+VIMGIGY F+ PVM+TF+A+S  GV  R KL+ C  DGTWSNVWGACTIVRD
Sbjct: 92  TVVGVVGSVIMGIGYGFICPVMDTFKAVSMEGVSLRTKLIRCFTDGTWSNVWGACTIVRD 151

Query: 135 FGDFSFHSYFSVMDELLEAKEDEKRIELKVSQVPGCIVSAVLGVV 1
           F DFSFHSYFSVMD LLE+K  EK IELKV ++PGCI+ A+LGV+
Sbjct: 152 FADFSFHSYFSVMDGLLESK-GEKPIELKVFEIPGCILCAILGVL 195


>ref|XP_002522369.1| conserved hypothetical protein [Ricinus communis]
           gi|223538447|gb|EEF40053.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 550

 Score =  149 bits (375), Expect = 3e-34
 Identities = 67/104 (64%), Positives = 86/104 (82%), Gaps = 1/104 (0%)
 Frame = -1

Query: 309 TVVGLVGTVIMGIGYAFVWPVMETFRAISKPGVRN-KLLGCLADGTWSNVWGACTIVRDF 133
           TV+G+ G+ IMG GY F+WPVMETFRAIS  G  N KL+ C  +GTW+ VWGACT+VRDF
Sbjct: 92  TVIGVAGSAIMGAGYGFIWPVMETFRAISMEGPINMKLIRCFTEGTWTCVWGACTVVRDF 151

Query: 132 GDFSFHSYFSVMDELLEAKEDEKRIELKVSQVPGCIVSAVLGVV 1
            DFSFHSYFSVMD LL++K++E+ IELK++QVPGCI++A L ++
Sbjct: 152 ADFSFHSYFSVMDGLLKSKDEEEPIELKIAQVPGCILAACLAIL 195


>ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|222853077|gb|EEE90624.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  145 bits (366), Expect = 3e-33
 Identities = 72/104 (69%), Positives = 86/104 (82%), Gaps = 1/104 (0%)
 Frame = -1

Query: 309 TVVGLVGTVIMGIGYAFVWPVMETFRAISKPG-VRNKLLGCLADGTWSNVWGACTIVRDF 133
           TVVG+VG+ IMG  Y F+WPVMETFRAISK G +  KL+ C  DGTWS V GACT+VRDF
Sbjct: 92  TVVGVVGSAIMGAMYGFIWPVMETFRAISKEGSICMKLIRCFTDGTWSCVRGACTVVRDF 151

Query: 132 GDFSFHSYFSVMDELLEAKEDEKRIELKVSQVPGCIVSAVLGVV 1
            DFSFHSYFSVMDELL +K +E  IELKV+Q+PGCI++A+LG+V
Sbjct: 152 VDFSFHSYFSVMDELLASKGEEP-IELKVAQIPGCILAAILGIV 194


>ref|NP_001053123.1| Os04g0483200 [Oryza sativa Japonica Group]
           gi|38345330|emb|CAE03141.2| OSJNBa0081L15.3 [Oryza
           sativa Japonica Group] gi|113564694|dbj|BAF15037.1|
           Os04g0483200 [Oryza sativa Japonica Group]
           gi|215697414|dbj|BAG91408.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218195075|gb|EEC77502.1| hypothetical protein
           OsI_16361 [Oryza sativa Indica Group]
           gi|222629077|gb|EEE61209.1| hypothetical protein
           OsJ_15229 [Oryza sativa Japonica Group]
          Length = 588

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/103 (44%), Positives = 69/103 (66%), Gaps = 1/103 (0%)
 Frame = -1

Query: 306 VVGLVGTVIMGIGYAFVWPVMETFRAISKPGVRNKLLGCLADGTWSNVWGACTIVRDFGD 127
           +VG+ G+++ G+ Y F+ P+M TF A+ K G     + C  DGTWS + G+CTIVRD  D
Sbjct: 93  IVGIPGSILAGLVYGFLAPIMATFGAVGK-GKEKPFVHCFVDGTWSTITGSCTIVRDVKD 151

Query: 126 FSFHSYFSVMDEL-LEAKEDEKRIELKVSQVPGCIVSAVLGVV 1
             FHSYFS+MD+L L+A  D K  E+++  +PG ++SA  G++
Sbjct: 152 LLFHSYFSIMDDLRLQAPPDNKPYEIRLLDIPGALLSAACGLI 194


Top