BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040720
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi...   114   6e-24
ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_003622728.1| Poly(A)-specific ribonuclease PARN-like prot...   111   5e-23
ref|XP_004161545.1| PREDICTED: LOW QUALITY PROTEIN: poly(A)-spec...   107   8e-22

>ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|222835296|gb|EEE73731.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/105 (55%), Positives = 75/105 (71%)
 Frame = -1

Query: 316 QSWKKSVKQVTKTNFVESLKELKNDIKNCDFIAISSSKTGSFSSQAPWARVLPHLDTLET 137
           Q W  S+KQVTK+NF ++LK++K+ + N DF+A+S   TGSFS  APW RV P  DT +T
Sbjct: 26  QQW--SIKQVTKSNFADTLKDIKSHVSNSDFVAVSLQNTGSFS--APWQRVSP-FDTADT 80

Query: 136 AYLKNKHAAEKFQIFQFMVCPFTLKTSTICSNPKLVAYPYNFHLF 2
           AYLK K+AAE+FQ+  F VCP T++ S      K+ AYPYNFHLF
Sbjct: 81  AYLKAKYAAERFQVLHFAVCPITVRAS------KVTAYPYNFHLF 119


>ref|XP_002527264.1| ribonuclease, putative [Ricinus communis]
           gi|223533357|gb|EEF35108.1| ribonuclease, putative
           [Ricinus communis]
          Length = 624

 Score =  114 bits (286), Expect = 6e-24
 Identities = 65/123 (52%), Positives = 80/123 (65%), Gaps = 6/123 (4%)
 Frame = -1

Query: 352 LLLQKRFFCSEKQSWKK------SVKQVTKTNFVESLKELKNDIKNCDFIAISSSKTGSF 191
           L LQ+R FC++    +       +VKQ+TK+NF +SL E+ + I   DFI+IS   TGSF
Sbjct: 8   LRLQRRLFCTKIHHHRAHTHNQWNVKQITKSNFADSLPEINSHIMCSDFISISLKTTGSF 67

Query: 190 SSQAPWARVLPHLDTLETAYLKNKHAAEKFQIFQFMVCPFTLKTSTICSNPKLVAYPYNF 11
           SS  PW RV P  DT + AYLK+KHAAEKFQI Q  VCPFT+  S      K+ AYPYNF
Sbjct: 68  SS--PWHRVSP-FDTPDVAYLKSKHAAEKFQILQLAVCPFTVSAS------KVTAYPYNF 118

Query: 10  HLF 2
           HLF
Sbjct: 119 HLF 121


>ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|222862012|gb|EEE99554.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  114 bits (286), Expect = 6e-24
 Identities = 62/124 (50%), Positives = 82/124 (66%), Gaps = 8/124 (6%)
 Frame = -1

Query: 349 LLQKRFFCSE--------KQSWKKSVKQVTKTNFVESLKELKNDIKNCDFIAISSSKTGS 194
           LLQ+R   +         +Q W  SVKQVTK+NF ++L+++K+ + N DF+A+S   TG 
Sbjct: 7   LLQRRLLSTSVTRTHHKPQQQW--SVKQVTKSNFADTLEDIKSHVSNSDFVAVSLQNTGF 64

Query: 193 FSSQAPWARVLPHLDTLETAYLKNKHAAEKFQIFQFMVCPFTLKTSTICSNPKLVAYPYN 14
           FS  APW RV P  DT +TAYLK K+AAE+FQ+  F VCPFT++ S      K+ AYPYN
Sbjct: 65  FS--APWQRVSP-FDTADTAYLKAKYAAERFQVLHFAVCPFTVRAS------KVTAYPYN 115

Query: 13  FHLF 2
           FHLF
Sbjct: 116 FHLF 119


>ref|XP_003622728.1| Poly(A)-specific ribonuclease PARN-like protein [Medicago
           truncatula] gi|355497743|gb|AES78946.1| Poly(A)-specific
           ribonuclease PARN-like protein [Medicago truncatula]
          Length = 206

 Score =  111 bits (278), Expect = 5e-23
 Identities = 63/114 (55%), Positives = 77/114 (67%)
 Frame = -1

Query: 343 QKRFFCSEKQSWKKSVKQVTKTNFVESLKELKNDIKNCDFIAISSSKTGSFSSQAPWARV 164
           QKR  C++  S K  VKQVT +NF +SL+E+K +I N DFIAIS  KTGS SS  PW RV
Sbjct: 14  QKRSLCTKISSSKWKVKQVTISNFNDSLEEIKTNISNSDFIAISMEKTGS-SSTTPWHRV 72

Query: 163 LPHLDTLETAYLKNKHAAEKFQIFQFMVCPFTLKTSTICSNPKLVAYPYNFHLF 2
            P  DT ETAYLK   +A++FQ+ QF VCPF++  S       LVA+PYNF LF
Sbjct: 73  QP-FDTAETAYLKASQSAQRFQLLQFAVCPFSVTDSN-----NLVAHPYNFLLF 120


>ref|XP_004161545.1| PREDICTED: LOW QUALITY PROTEIN: poly(A)-specific ribonuclease
           PARN-like [Cucumis sativus]
          Length = 610

 Score =  107 bits (268), Expect = 8e-22
 Identities = 60/115 (52%), Positives = 80/115 (69%)
 Frame = -1

Query: 346 LQKRFFCSEKQSWKKSVKQVTKTNFVESLKELKNDIKNCDFIAISSSKTGSFSSQAPWAR 167
           L +R + +  Q W  SV+QV  +NF+ SL++LKNDI + DFIA+S  +TGS  S  PW R
Sbjct: 10  LHRRLYTTTSQ-W--SVRQVRNSNFLGSLEDLKNDISDSDFIALSLQRTGS--SSFPWHR 64

Query: 166 VLPHLDTLETAYLKNKHAAEKFQIFQFMVCPFTLKTSTICSNPKLVAYPYNFHLF 2
           + P  DT +TAY K K+AAEKFQI QF +CPF+++ S      KL+A+PYNFHLF
Sbjct: 65  LQP-FDTHDTAYCKAKYAAEKFQIIQFSLCPFSVRDS------KLIAHPYNFHLF 112