BLASTX nr result

ID: Coptis23_contig00040702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040702
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82687.1| hypothetical protein VITISV_006267 [Vitis vinifera]   102   3e-20
emb|CAN80484.1| hypothetical protein VITISV_017184 [Vitis vinifera]   102   4e-20
emb|CAN66238.1| hypothetical protein VITISV_041838 [Vitis vinifera]   102   4e-20
emb|CAN62151.1| hypothetical protein VITISV_032403 [Vitis vinifera]   102   4e-20
gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsi...   101   7e-20

>emb|CAN82687.1| hypothetical protein VITISV_006267 [Vitis vinifera]
          Length = 969

 Score =  102 bits (254), Expect = 3e-20
 Identities = 44/79 (55%), Positives = 60/79 (75%)
 Frame = +3

Query: 12  KKAINDKINNLKNVGFIREVEYPEWIANIVVVPKKNDTVYLCVDFTNINQETPKDGFPLP 191
           ++ I D+IN L  VGFIREV YPEW+AN+VVVPKK     +CVD+TN+N   PKD FPLP
Sbjct: 34  QRVIQDEINKLLEVGFIREVSYPEWLANVVVVPKKEGKWRVCVDYTNLNNACPKDSFPLP 93

Query: 192 KIDQLVNQTASHELMSFMN 248
           +IDQ+V+ T+   ++SF++
Sbjct: 94  RIDQIVDSTSGQGMLSFLD 112


>emb|CAN80484.1| hypothetical protein VITISV_017184 [Vitis vinifera]
          Length = 842

 Score =  102 bits (253), Expect = 4e-20
 Identities = 44/79 (55%), Positives = 59/79 (74%)
 Frame = +3

Query: 12  KKAINDKINNLKNVGFIREVEYPEWIANIVVVPKKNDTVYLCVDFTNINQETPKDGFPLP 191
           +K I D+I+ L   GFIREVEYP+W+AN+VVVPKK     +CVD+TN+N   PKD FPLP
Sbjct: 34  QKIIRDEIDKLLEAGFIREVEYPDWLANVVVVPKKEGKWRVCVDYTNLNNACPKDSFPLP 93

Query: 192 KIDQLVNQTASHELMSFMN 248
           +IDQ+V+ T    ++SF+N
Sbjct: 94  RIDQIVDSTTGQGMLSFLN 112


>emb|CAN66238.1| hypothetical protein VITISV_041838 [Vitis vinifera]
          Length = 225

 Score =  102 bits (253), Expect = 4e-20
 Identities = 44/79 (55%), Positives = 61/79 (77%)
 Frame = +3

Query: 12  KKAINDKINNLKNVGFIREVEYPEWIANIVVVPKKNDTVYLCVDFTNINQETPKDGFPLP 191
           +K I D+I+ L  VGFIREV+YP+W+AN+VVVPKK     +CVD+TN+N   PKD FPLP
Sbjct: 34  QKIIRDEIDKLLEVGFIREVDYPDWLANVVVVPKKEGKWRVCVDYTNLNNACPKDSFPLP 93

Query: 192 KIDQLVNQTASHELMSFMN 248
           +IDQ+V+ TA   ++SF++
Sbjct: 94  RIDQIVDSTAGQGMLSFLD 112


>emb|CAN62151.1| hypothetical protein VITISV_032403 [Vitis vinifera]
          Length = 835

 Score =  102 bits (253), Expect = 4e-20
 Identities = 45/79 (56%), Positives = 59/79 (74%)
 Frame = +3

Query: 12  KKAINDKINNLKNVGFIREVEYPEWIANIVVVPKKNDTVYLCVDFTNINQETPKDGFPLP 191
           +K I D++     VGFIREVEYPEW+AN VVVPKK     +CVD+TN+N    KD FPLP
Sbjct: 34  QKVIQDEMEKFLEVGFIREVEYPEWLANAVVVPKKGGKWRVCVDYTNLNNACSKDSFPLP 93

Query: 192 KIDQLVNQTASHELMSFMN 248
           +IDQ+V+ TA HE++SF++
Sbjct: 94  RIDQIVDATAGHEVLSFLD 112


>gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score =  101 bits (251), Expect = 7e-20
 Identities = 44/78 (56%), Positives = 61/78 (78%)
 Frame = +3

Query: 15  KAINDKINNLKNVGFIREVEYPEWIANIVVVPKKNDTVYLCVDFTNINQETPKDGFPLPK 194
           KA+ND+++ L  +G IREV+YP+W+AN VVV KKN    +C+DFT++N+  PKD FPLP 
Sbjct: 478 KAVNDEVDKLLKIGSIREVQYPDWLANTVVVKKKNGKDRVCIDFTDLNKACPKDSFPLPH 537

Query: 195 IDQLVNQTASHELMSFMN 248
           ID+LV  TA +EL+SFM+
Sbjct: 538 IDRLVESTAGNELLSFMD 555


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