BLASTX nr result

ID: Coptis23_contig00040694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040694
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633298.1| PREDICTED: cellulose synthase-like protein H...   140   1e-31
emb|CBI28826.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_002302868.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002269831.2| PREDICTED: cellulose synthase-like protein H...   139   3e-31
emb|CAN60146.1| hypothetical protein VITISV_041923 [Vitis vinifera]   137   7e-31

>ref|XP_003633298.1| PREDICTED: cellulose synthase-like protein H1-like [Vitis vinifera]
          Length = 766

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/117 (56%), Positives = 79/117 (67%)
 Frame = -2

Query: 353 LWFRQCFAYLWMNLWGLASIPELCYSILPAYSLLTDTPFMPKVSETATLVAAPLFILYNV 174
           L FRQC AYLW   W L SIPELCY  LPAY ++  + F+PKV E A L+   LF+ YN 
Sbjct: 544 LQFRQCLAYLWFISWALRSIPELCYLALPAYCIMAGSHFLPKVQEPAVLIPISLFVSYNF 603

Query: 173 YVMSEFLGCGLSINAWWNNRRMSMITATTGRLFGVLAIVIKLAGLSETVFEVTPKEQ 3
           Y + E+ G G SI A WNN RM  ITA T  LFG  ++++KL GLSETVFEVT K+Q
Sbjct: 604 YTLFEYYGAGFSIRACWNNLRMGRITAVTAWLFGFFSVILKLLGLSETVFEVTKKDQ 660


>emb|CBI28826.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/117 (56%), Positives = 79/117 (67%)
 Frame = -2

Query: 353 LWFRQCFAYLWMNLWGLASIPELCYSILPAYSLLTDTPFMPKVSETATLVAAPLFILYNV 174
           L FRQC AYLW   W L SIPELCY  LPAY ++  + F+PKV E A L+   LF+ YN 
Sbjct: 529 LQFRQCLAYLWFISWALRSIPELCYLALPAYCIMAGSHFLPKVQEPAVLIPISLFVSYNF 588

Query: 173 YVMSEFLGCGLSINAWWNNRRMSMITATTGRLFGVLAIVIKLAGLSETVFEVTPKEQ 3
           Y + E+ G G SI A WNN RM  ITA T  LFG  ++++KL GLSETVFEVT K+Q
Sbjct: 589 YTLFEYYGAGFSIRACWNNLRMGRITAVTAWLFGFFSVILKLLGLSETVFEVTKKDQ 645


>ref|XP_002302868.1| predicted protein [Populus trichocarpa] gi|222844594|gb|EEE82141.1|
           predicted protein [Populus trichocarpa]
          Length = 749

 Score =  140 bits (352), Expect = 1e-31
 Identities = 61/117 (52%), Positives = 86/117 (73%)
 Frame = -2

Query: 353 LWFRQCFAYLWMNLWGLASIPELCYSILPAYSLLTDTPFMPKVSETATLVAAPLFILYNV 174
           L FRQC AYLW+ +WGL SIPE+CY++LPAY ++T++ F+PK  E A  +   LF+ Y +
Sbjct: 527 LQFRQCLAYLWILIWGLRSIPEICYAVLPAYCIITNSSFLPKAHEPAMYIHVALFLSYVI 586

Query: 173 YVMSEFLGCGLSINAWWNNRRMSMITATTGRLFGVLAIVIKLAGLSETVFEVTPKEQ 3
           Y + E+L  GLSI AWWNN+RM+ + AT   LFGV+++ +K+  +S TVFEVT K+Q
Sbjct: 587 YGLLEYLETGLSIRAWWNNQRMARVNATNAWLFGVISVFLKILRISGTVFEVTQKDQ 643


>ref|XP_002269831.2| PREDICTED: cellulose synthase-like protein H1-like [Vitis vinifera]
           gi|297739173|emb|CBI28824.3| unnamed protein product
           [Vitis vinifera]
          Length = 751

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/117 (55%), Positives = 80/117 (68%)
 Frame = -2

Query: 353 LWFRQCFAYLWMNLWGLASIPELCYSILPAYSLLTDTPFMPKVSETATLVAAPLFILYNV 174
           L FRQC AY+W+  W L SIPELCY  LPAY ++  + F+PKV E A L+   LF+ YN 
Sbjct: 529 LQFRQCLAYVWLISWALRSIPELCYLALPAYCIMAGSHFLPKVQEPAVLIPISLFVSYNF 588

Query: 173 YVMSEFLGCGLSINAWWNNRRMSMITATTGRLFGVLAIVIKLAGLSETVFEVTPKEQ 3
           Y + E+ G G SI A WNN RM  ITA T  LFG  ++++KL GLSETVFEVT K+Q
Sbjct: 589 YNLFEYYGAGFSIRACWNNLRMGRITAVTAWLFGFFSVILKLLGLSETVFEVTKKDQ 645


>emb|CAN60146.1| hypothetical protein VITISV_041923 [Vitis vinifera]
          Length = 1026

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/117 (55%), Positives = 78/117 (66%)
 Frame = -2

Query: 353  LWFRQCFAYLWMNLWGLASIPELCYSILPAYSLLTDTPFMPKVSETATLVAAPLFILYNV 174
            L FRQC AY W   W L SIPELCY  LPAY ++  + F+PKV E A L+   LF+ YN 
Sbjct: 804  LQFRQCLAYXWXISWALRSIPELCYLALPAYCIMAGSHFLPKVQEPAVLIPISLFVSYNF 863

Query: 173  YVMSEFLGCGLSINAWWNNRRMSMITATTGRLFGVLAIVIKLAGLSETVFEVTPKEQ 3
            Y + E+ G G SI A WNN RM  ITA T  LFG  ++++KL GLSETVFEVT K+Q
Sbjct: 864  YXLFEYYGAGFSIRACWNNLRMGRITAVTAWLFGFFSVILKLLGLSETVFEVTKKDQ 920


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