BLASTX nr result

ID: Coptis23_contig00040686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040686
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64548.1| hypothetical protein VITISV_026047 [Vitis vinifera]   138   5e-31
emb|CAN77889.1| hypothetical protein VITISV_003778 [Vitis vinifera]   138   5e-31
emb|CAN63412.1| hypothetical protein VITISV_011051 [Vitis vinifera]   137   9e-31
emb|CAN68134.1| hypothetical protein VITISV_035651 [Vitis vinifera]   136   2e-30
emb|CAN62918.1| hypothetical protein VITISV_029735 [Vitis vinifera]   135   3e-30

>emb|CAN64548.1| hypothetical protein VITISV_026047 [Vitis vinifera]
          Length = 876

 Score =  138 bits (347), Expect = 5e-31
 Identities = 61/121 (50%), Positives = 89/121 (73%)
 Frame = -3

Query: 373 SNRYQMPIVVFAGINNHLHTLVFGFALIISECDDTYKWVLKSFIDAMCGEHPKSVITDGD 194
           +N Y+ P+VV  G+N+H  T+VFG AL+I E   TY+WVL++F++AM  + P SV+TDGD
Sbjct: 285 TNAYKKPLVVLVGVNHHHXTVVFGCALLIDESVGTYEWVLETFLEAMMNKRPISVVTDGD 344

Query: 193 AAIRKALKSILPDSKHRLCSWHVLKNCITNVKIPGFATEFSSIMFMKCSRGEFEERWRQL 14
            A+RKA+K +LPD+ HRLCSWH+ +N  TNV I  F++ F+  MFM+ +  EFE+ W ++
Sbjct: 345 KAMRKAIKKVLPDTCHRLCSWHLQRNAFTNVHIKDFSSIFARCMFMRGNEEEFEKVWHEM 404

Query: 13  V 11
           V
Sbjct: 405 V 405


>emb|CAN77889.1| hypothetical protein VITISV_003778 [Vitis vinifera]
          Length = 934

 Score =  138 bits (347), Expect = 5e-31
 Identities = 62/124 (50%), Positives = 85/124 (68%)
 Frame = -3

Query: 373 SNRYQMPIVVFAGINNHLHTLVFGFALIISECDDTYKWVLKSFIDAMCGEHPKSVITDGD 194
           +N Y+ P+V+  GIN+H  T+VFG AL++ E   TY WVL++F+DAM  + P SVITDGD
Sbjct: 425 TNAYKKPLVILVGINHHHQTIVFGCALLVDESVSTYTWVLETFLDAMNNKKPLSVITDGD 484

Query: 193 AAIRKALKSILPDSKHRLCSWHVLKNCITNVKIPGFATEFSSIMFMKCSRGEFEERWRQL 14
            A+RKA+K I PDS HRLC+WH+ +N  TNV +  F   FS  MFM+ +  EFE  W  +
Sbjct: 485 KAMRKAIKRIFPDSCHRLCAWHIQRNAFTNVHVKDFTNHFSKCMFMEGTVEEFECAWNDM 544

Query: 13  VEKY 2
           +E +
Sbjct: 545 LEMF 548


>emb|CAN63412.1| hypothetical protein VITISV_011051 [Vitis vinifera]
          Length = 782

 Score =  137 bits (345), Expect = 9e-31
 Identities = 60/121 (49%), Positives = 89/121 (73%)
 Frame = -3

Query: 373 SNRYQMPIVVFAGINNHLHTLVFGFALIISECDDTYKWVLKSFIDAMCGEHPKSVITDGD 194
           +N Y+ P+VV  G+N+H  T+VFG AL+I E   TY+WVL++F++AM  + P SV+TDGD
Sbjct: 296 TNAYKKPLVVLVGVNHHHQTVVFGCALLIDESVGTYEWVLETFLEAMMNKRPISVVTDGD 355

Query: 193 AAIRKALKSILPDSKHRLCSWHVLKNCITNVKIPGFATEFSSIMFMKCSRGEFEERWRQL 14
            A+RKA+K +LPD+ HRLCSWH+ +N  TNV +  F++ F+  MFM+ +  EFE+ W ++
Sbjct: 356 KAMRKAIKKVLPDTCHRLCSWHLQRNAFTNVHMKDFSSIFARCMFMRGNEEEFEKVWHEM 415

Query: 13  V 11
           V
Sbjct: 416 V 416


>emb|CAN68134.1| hypothetical protein VITISV_035651 [Vitis vinifera]
          Length = 612

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/124 (50%), Positives = 84/124 (67%)
 Frame = -3

Query: 373 SNRYQMPIVVFAGINNHLHTLVFGFALIISECDDTYKWVLKSFIDAMCGEHPKSVITDGD 194
           +N Y+ P+V+  GIN+H  T+VFG AL++ E   TY WVL++F+DAM  + P SVITDGD
Sbjct: 85  TNAYKKPLVILVGINHHHQTIVFGCALLVDESVSTYTWVLETFLDAMNNKKPISVITDGD 144

Query: 193 AAIRKALKSILPDSKHRLCSWHVLKNCITNVKIPGFATEFSSIMFMKCSRGEFEERWRQL 14
            A+RKA+K I PDS HRLC WH+ +N  TNV +  F   FS  MFM+ +  EFE  W  +
Sbjct: 145 KAMRKAIKRIFPDSCHRLCVWHIQRNAFTNVHVKDFTNHFSKCMFMEGTVEEFECAWNDM 204

Query: 13  VEKY 2
           +E +
Sbjct: 205 LEMF 208


>emb|CAN62918.1| hypothetical protein VITISV_029735 [Vitis vinifera]
          Length = 742

 Score =  135 bits (341), Expect = 3e-30
 Identities = 61/121 (50%), Positives = 87/121 (71%)
 Frame = -3

Query: 373 SNRYQMPIVVFAGINNHLHTLVFGFALIISECDDTYKWVLKSFIDAMCGEHPKSVITDGD 194
           +N Y+ P+VV  G+N+H  T+VFG AL+I E   TY+WVL +F+DAM  + P SV+TD D
Sbjct: 265 TNAYKKPLVVLVGVNHHHQTVVFGCALLIDESVGTYEWVLGTFLDAMMNKRPISVVTDED 324

Query: 193 AAIRKALKSILPDSKHRLCSWHVLKNCITNVKIPGFATEFSSIMFMKCSRGEFEERWRQL 14
            A+RKA+K +LPD+ HRLCSWH+ +N  TNV I  F++ F+  MFM+ +  EFE+ W ++
Sbjct: 325 KAMRKAIKKVLPDTCHRLCSWHLQRNAFTNVHIKDFSSIFARCMFMRGNEEEFEKVWHEM 384

Query: 13  V 11
           V
Sbjct: 385 V 385


Top