BLASTX nr result
ID: Coptis23_contig00040675
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00040675 (343 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284680.1| PREDICTED: uncharacterized protein LOC100245... 66 3e-09 ref|XP_002302211.1| predicted protein [Populus trichocarpa] gi|1... 58 9e-07 ref|XP_002520281.1| conserved hypothetical protein [Ricinus comm... 56 4e-06 >ref|XP_002284680.1| PREDICTED: uncharacterized protein LOC100245343 [Vitis vinifera] gi|302141748|emb|CBI18951.3| unnamed protein product [Vitis vinifera] Length = 301 Score = 65.9 bits (159), Expect = 3e-09 Identities = 45/87 (51%), Positives = 50/87 (57%), Gaps = 7/87 (8%) Frame = -1 Query: 343 VKSVTVKLPA------AAKSVVLPVKVKQQNDFVSSVPQKRARSPSPTLHRQNSFRREPE 182 VKSV+ K A A SVV+P K V S PQKR R+ SP L RQ SFRREPE Sbjct: 110 VKSVSGKFHAPKLVSPAKSSVVVPAKQLMPQRVVGSTPQKRVRASSPVLVRQKSFRREPE 169 Query: 181 RNHTGTNSFPQRNLGSS-SPSRRFYSD 104 R ++ S P R L SS SPSRRF D Sbjct: 170 RPNS-AYSLPSRTLRSSPSPSRRFEGD 195 >ref|XP_002302211.1| predicted protein [Populus trichocarpa] gi|118483526|gb|ABK93661.1| unknown [Populus trichocarpa] gi|222843937|gb|EEE81484.1| predicted protein [Populus trichocarpa] Length = 309 Score = 57.8 bits (138), Expect = 9e-07 Identities = 36/76 (47%), Positives = 44/76 (57%), Gaps = 1/76 (1%) Frame = -1 Query: 325 KLPAAAKSVVLPVKVKQQNDFVSSVPQKRARSPSPT-LHRQNSFRREPERNHTGTNSFPQ 149 KL + AK VV P++ +S P KR RS SPT L RQ SFRREP+R + + Sbjct: 132 KLGSPAKQVVAPMQQSIPQKVNTSTPHKRVRSNSPTALTRQKSFRREPDRFNPSYSLPIS 191 Query: 148 RNLGSSSPSRRFYSDT 101 R L S SPSRRF D+ Sbjct: 192 RTLRSPSPSRRFNGDS 207 >ref|XP_002520281.1| conserved hypothetical protein [Ricinus communis] gi|223540500|gb|EEF42067.1| conserved hypothetical protein [Ricinus communis] Length = 321 Score = 55.8 bits (133), Expect = 4e-06 Identities = 36/71 (50%), Positives = 41/71 (57%), Gaps = 1/71 (1%) Frame = -1 Query: 310 AKSVVLPVKVKQQNDFVSSVPQKRARSPSPT-LHRQNSFRREPERNHTGTNSFPQRNLGS 134 AK LP+K +S PQKR RS SPT ++RQ SFRRE ER NS R L S Sbjct: 150 AKQASLPLKQSSPQKVNASTPQKRVRSNSPTPVNRQKSFRRESER--FTYNSLQCRTLRS 207 Query: 133 SSPSRRFYSDT 101 SPSRRF D+ Sbjct: 208 QSPSRRFDGDS 218