BLASTX nr result

ID: Coptis23_contig00040646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040646
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134560.1| PREDICTED: DNA replication licensing factor ...   103   1e-20
emb|CBI30852.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002276065.1| PREDICTED: DNA replication licensing factor ...   103   1e-20
gb|AAN73053.2| mini-chromosome maintenance protein MCM3 [Pisum s...   101   6e-20
emb|CAA10166.1| MCM3 protein [Pisum sativum]                          101   6e-20

>ref|XP_004134560.1| PREDICTED: DNA replication licensing factor MCM3 homolog 1-like
           [Cucumis sativus] gi|449505920|ref|XP_004162604.1|
           PREDICTED: DNA replication licensing factor MCM3 homolog
           1-like [Cucumis sativus]
          Length = 771

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/88 (60%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
 Frame = -2

Query: 289 ETADAMEVDEQPAG-QPNISPERVEAFGTTFGQHMRANHLDLISIADIEQVVNMGAAVRY 113
           E  D ME+D+ PA  + ++S ER EAF + FGQHMRANHLD+ISIADIE VVN     RY
Sbjct: 683 EGTDTMEIDDPPAEPELDLSAERTEAFNSLFGQHMRANHLDVISIADIENVVNTAGDNRY 742

Query: 112 TREEITILLERLQGDNRLMIVEEMVHMM 29
           T  EI +LL+RLQ DNR+MI + MVHM+
Sbjct: 743 TAAEIMLLLQRLQDDNRVMIADTMVHMI 770


>emb|CBI30852.3| unnamed protein product [Vitis vinifera]
          Length = 776

 Score =  103 bits (258), Expect = 1e-20
 Identities = 56/89 (62%), Positives = 70/89 (78%), Gaps = 3/89 (3%)
 Frame = -2

Query: 286 TADAMEVDEQPAG--QPNISPERVEAFGTTFGQHMRANHLDLISIADIEQVVNMGAAVRY 113
           TADAMEVD  PA     NIS ERVEAF + FGQH+RANH+DLISIAD+E+VVN GA V+Y
Sbjct: 688 TADAMEVDASPAAPFSGNISSERVEAFDSVFGQHIRANHVDLISIADVEKVVNSGAPVQY 747

Query: 112 TREEITILLERLQGDNRLMIVE-EMVHMM 29
           +R EI  LL+RL+  NRLMI + ++VH++
Sbjct: 748 SRAEILFLLKRLEDVNRLMIDDNDVVHII 776


>ref|XP_002276065.1| PREDICTED: DNA replication licensing factor MCM3 homolog 1-like
           [Vitis vinifera]
          Length = 773

 Score =  103 bits (258), Expect = 1e-20
 Identities = 56/89 (62%), Positives = 70/89 (78%), Gaps = 3/89 (3%)
 Frame = -2

Query: 286 TADAMEVDEQPAG--QPNISPERVEAFGTTFGQHMRANHLDLISIADIEQVVNMGAAVRY 113
           TADAMEVD  PA     NIS ERVEAF + FGQH+RANH+DLISIAD+E+VVN GA V+Y
Sbjct: 685 TADAMEVDASPAAPFSGNISSERVEAFDSVFGQHIRANHVDLISIADVEKVVNSGAPVQY 744

Query: 112 TREEITILLERLQGDNRLMIVE-EMVHMM 29
           +R EI  LL+RL+  NRLMI + ++VH++
Sbjct: 745 SRAEILFLLKRLEDVNRLMIDDNDVVHII 773


>gb|AAN73053.2| mini-chromosome maintenance protein MCM3 [Pisum sativum]
          Length = 710

 Score =  101 bits (252), Expect = 6e-20
 Identities = 52/88 (59%), Positives = 66/88 (75%), Gaps = 2/88 (2%)
 Frame = -2

Query: 286 TADAMEVDEQPAGQP--NISPERVEAFGTTFGQHMRANHLDLISIADIEQVVNMGAAVRY 113
           T++AME+D+  A  P   ++PER+EAF + FGQHMRAN LD ISIADIE V+N GA   Y
Sbjct: 622 TSEAMELDDTSAAPPAVGLTPERIEAFNSLFGQHMRANPLDQISIADIEDVINRGADSTY 681

Query: 112 TREEITILLERLQGDNRLMIVEEMVHMM 29
           +  +I +LLE+LQ DNRLMIV  MVHM+
Sbjct: 682 SSADILLLLEKLQEDNRLMIVAGMVHMI 709


>emb|CAA10166.1| MCM3 protein [Pisum sativum]
          Length = 656

 Score =  101 bits (252), Expect = 6e-20
 Identities = 52/88 (59%), Positives = 66/88 (75%), Gaps = 2/88 (2%)
 Frame = -2

Query: 286 TADAMEVDEQPAGQP--NISPERVEAFGTTFGQHMRANHLDLISIADIEQVVNMGAAVRY 113
           T++AME+D+  A  P   ++PER+EAF + FGQHMRAN LD ISIADIE V+N GA   Y
Sbjct: 568 TSEAMELDDTSAAPPAVGLTPERIEAFNSLFGQHMRANPLDQISIADIEDVINRGADSTY 627

Query: 112 TREEITILLERLQGDNRLMIVEEMVHMM 29
           +  +I +LLE+LQ DNRLMIV  MVHM+
Sbjct: 628 SSADILLLLEKLQEDNRLMIVAGMVHMI 655


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