BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040634
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containi...   213   1e-53
ref|XP_002510791.1| pentatricopeptide repeat-containing protein,...   213   1e-53
ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containi...   212   2e-53
emb|CBI22748.3| unnamed protein product [Vitis vinifera]              211   5e-53
ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containi...   211   5e-53

>ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Glycine max]
          Length = 480

 Score =  213 bits (543), Expect = 1e-53
 Identities = 98/126 (77%), Positives = 113/126 (89%)
 Frame = -3

Query: 379 CEEFKAMWRLVDEMTENGVPTTARTFNILICTCGEVGLARKLVESFIKSKTFNFRPFKHS 200
           CEEFKA+WRLVDEM E G+P TARTFNILI TCGE GLA+ LVE FIKSKTFNFRPFKHS
Sbjct: 169 CEEFKALWRLVDEMVEKGLPATARTFNILIRTCGEAGLAKSLVERFIKSKTFNFRPFKHS 228

Query: 199 FNAILHSLLVIHQYRLVEWVYQQMVLEGHSPDILTYNVLMCTKYRLGKLDQFHRLLDDMC 20
           +NAILH LLV++QY+L+EWVYQQ++L+G S DILTYN++M  KYRLGKLDQFHRLLD+M 
Sbjct: 229 YNAILHGLLVLNQYKLIEWVYQQLLLDGFSSDILTYNIVMYAKYRLGKLDQFHRLLDEMG 288

Query: 19  KNGFSP 2
           +NGFSP
Sbjct: 289 RNGFSP 294


>ref|XP_002510791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549906|gb|EEF51393.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 475

 Score =  213 bits (542), Expect = 1e-53
 Identities = 97/126 (76%), Positives = 112/126 (88%)
 Frame = -3

Query: 379 CEEFKAMWRLVDEMTENGVPTTARTFNILICTCGEVGLARKLVESFIKSKTFNFRPFKHS 200
           CEEFKAMWRL+DEM ENG PTTARTFNILICTCG  GLARK+VE FIKSKTFN+RPFKHS
Sbjct: 167 CEEFKAMWRLLDEMVENGFPTTARTFNILICTCGGAGLARKVVERFIKSKTFNYRPFKHS 226

Query: 199 FNAILHSLLVIHQYRLVEWVYQQMVLEGHSPDILTYNVLMCTKYRLGKLDQFHRLLDDMC 20
           +NAIL SLL I +Y+L+EWV+QQM++EG+ PD LTYN+LMC KYRLGKL  FHRLLD+M 
Sbjct: 227 YNAILLSLLAIREYKLIEWVHQQMLVEGYCPDTLTYNILMCAKYRLGKLHHFHRLLDEMG 286

Query: 19  KNGFSP 2
           ++GFSP
Sbjct: 287 RSGFSP 292


>ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like isoform 1 [Glycine max]
           gi|356575967|ref|XP_003556107.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g60050-like isoform 2 [Glycine max]
          Length = 480

 Score =  212 bits (540), Expect = 2e-53
 Identities = 98/126 (77%), Positives = 112/126 (88%)
 Frame = -3

Query: 379 CEEFKAMWRLVDEMTENGVPTTARTFNILICTCGEVGLARKLVESFIKSKTFNFRPFKHS 200
           CEEFKA+WRLVDEM E G+P TARTFNILI TCGE GLA+ LVE FIKSKTFNFRPFKHS
Sbjct: 169 CEEFKALWRLVDEMIEKGLPATARTFNILIRTCGEAGLAKNLVERFIKSKTFNFRPFKHS 228

Query: 199 FNAILHSLLVIHQYRLVEWVYQQMVLEGHSPDILTYNVLMCTKYRLGKLDQFHRLLDDMC 20
           +NAILH LLV++QY+L+EWVYQQM+L+G   DILTYN++M  KYRLGKLDQFHRLLD+M 
Sbjct: 229 YNAILHGLLVLNQYKLIEWVYQQMLLDGFPSDILTYNIVMYAKYRLGKLDQFHRLLDEMG 288

Query: 19  KNGFSP 2
           +NGFSP
Sbjct: 289 RNGFSP 294


>emb|CBI22748.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  211 bits (537), Expect = 5e-53
 Identities = 96/125 (76%), Positives = 110/125 (88%)
 Frame = -3

Query: 376 EEFKAMWRLVDEMTENGVPTTARTFNILICTCGEVGLARKLVESFIKSKTFNFRPFKHSF 197
           +EFKAMWRLVDEM E G P TARTF ILICTCGE GLAR+ VE F+KSK FN+RPFKHS+
Sbjct: 207 DEFKAMWRLVDEMIEQGFPVTARTFQILICTCGEAGLARRAVERFVKSKNFNYRPFKHSY 266

Query: 196 NAILHSLLVIHQYRLVEWVYQQMVLEGHSPDILTYNVLMCTKYRLGKLDQFHRLLDDMCK 17
           NAILH LL + QY+LVEWVYQQM+LE +SPDILTYN++MCTKYRLGKLDQFHRLL+++  
Sbjct: 267 NAILHCLLCLKQYKLVEWVYQQMLLEDYSPDILTYNIVMCTKYRLGKLDQFHRLLEELGT 326

Query: 16  NGFSP 2
           NGFSP
Sbjct: 327 NGFSP 331


>ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Vitis vinifera]
          Length = 514

 Score =  211 bits (537), Expect = 5e-53
 Identities = 96/125 (76%), Positives = 110/125 (88%)
 Frame = -3

Query: 376 EEFKAMWRLVDEMTENGVPTTARTFNILICTCGEVGLARKLVESFIKSKTFNFRPFKHSF 197
           +EFKAMWRLVDEM E G P TARTF ILICTCGE GLAR+ VE F+KSK FN+RPFKHS+
Sbjct: 203 DEFKAMWRLVDEMIEQGFPVTARTFQILICTCGEAGLARRAVERFVKSKNFNYRPFKHSY 262

Query: 196 NAILHSLLVIHQYRLVEWVYQQMVLEGHSPDILTYNVLMCTKYRLGKLDQFHRLLDDMCK 17
           NAILH LL + QY+LVEWVYQQM+LE +SPDILTYN++MCTKYRLGKLDQFHRLL+++  
Sbjct: 263 NAILHCLLCLKQYKLVEWVYQQMLLEDYSPDILTYNIVMCTKYRLGKLDQFHRLLEELGT 322

Query: 16  NGFSP 2
           NGFSP
Sbjct: 323 NGFSP 327