BLASTX nr result

ID: Coptis23_contig00040622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040622
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282932.1| PREDICTED: protein TRANSPARENT TESTA 12 [Vit...   124   1e-26
ref|XP_003545155.1| PREDICTED: protein TRANSPARENT TESTA 12-like...   122   4e-26
ref|XP_002307572.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
ref|XP_002307571.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
gb|AGC55236.1| TT12a [Gossypium arboreum]                             119   2e-25

>ref|XP_002282932.1| PREDICTED: protein TRANSPARENT TESTA 12 [Vitis vinifera]
           gi|302143501|emb|CBI22062.3| unnamed protein product
           [Vitis vinifera]
          Length = 504

 Score =  124 bits (310), Expect = 1e-26
 Identities = 57/102 (55%), Positives = 77/102 (75%)
 Frame = -2

Query: 315 WLLVIITGLYIILSPSCQKT*TGFSAIAFKGLLFFLKLSVSSICMLSFELWYSMGLVLTV 136
           W+LV++  LYI+LSPSC++T TGFS+ AFKG+  + KL+V+S  ML  E+WY+ GLVL  
Sbjct: 239 WILVVVIALYILLSPSCKETWTGFSSKAFKGMWPYFKLTVASAVMLCLEIWYNQGLVLIS 298

Query: 135 GYFANPIVSVASFSICLNCLNWDLMFMLGMSEAARIRVSIEL 10
           G  +NP +S+ S SIC+N LNWD+ FMLG+S A  +RVS EL
Sbjct: 299 GLLSNPTISLDSISICMNYLNWDMQFMLGLSAATSVRVSNEL 340


>ref|XP_003545155.1| PREDICTED: protein TRANSPARENT TESTA 12-like [Glycine max]
          Length = 505

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/102 (56%), Positives = 74/102 (72%)
 Frame = -2

Query: 315 WLLVIITGLYIILSPSCQKT*TGFSAIAFKGLLFFLKLSVSSICMLSFELWYSMGLVLTV 136
           WLLV+  GLYII SP C++T  GFS  AFKG+  + KL+V+S  ML  E+WY+ GLVL  
Sbjct: 239 WLLVLFNGLYIIFSPRCKETWAGFSVKAFKGIWPYFKLTVASAVMLCLEVWYNQGLVLLS 298

Query: 135 GYFANPIVSVASFSICLNCLNWDLMFMLGMSEAARIRVSIEL 10
           G  +NP +S+ S SIC+N LNWD+ FMLG+S AA +RVS EL
Sbjct: 299 GLLSNPTISLDSISICMNYLNWDMQFMLGLSTAASVRVSNEL 340


>ref|XP_002307572.1| predicted protein [Populus trichocarpa] gi|222857021|gb|EEE94568.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score =  120 bits (300), Expect = 2e-25
 Identities = 58/102 (56%), Positives = 73/102 (71%)
 Frame = -2

Query: 315 WLLVIITGLYIILSPSCQKT*TGFSAIAFKGLLFFLKLSVSSICMLSFELWYSMGLVLTV 136
           WL VI+ GLYIILSPSC++T TG SA AF G+  + KL+VSS  ML  E+WYS GLVL  
Sbjct: 240 WLFVILNGLYIILSPSCKETWTGLSASAFTGIWPYFKLTVSSAVMLCLEIWYSQGLVLIS 299

Query: 135 GYFANPIVSVASFSICLNCLNWDLMFMLGMSEAARIRVSIEL 10
           G   +P V++ S SIC+N LNWD+ FMLG+S +  +RV  EL
Sbjct: 300 GLLTDPTVALDSISICMNYLNWDMQFMLGLSASTSVRVGNEL 341


>ref|XP_002307571.1| predicted protein [Populus trichocarpa] gi|222857020|gb|EEE94567.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score =  120 bits (300), Expect = 2e-25
 Identities = 58/102 (56%), Positives = 73/102 (71%)
 Frame = -2

Query: 315 WLLVIITGLYIILSPSCQKT*TGFSAIAFKGLLFFLKLSVSSICMLSFELWYSMGLVLTV 136
           WL VI+ GLYIILSPSC++T TG SA AF G+  + KL+VSS  ML  E+WYS GLVL  
Sbjct: 240 WLFVILNGLYIILSPSCKETWTGLSASAFTGIWPYFKLTVSSAVMLCLEIWYSQGLVLIS 299

Query: 135 GYFANPIVSVASFSICLNCLNWDLMFMLGMSEAARIRVSIEL 10
           G   +P V++ S SIC+N LNWD+ FMLG+S +  +RV  EL
Sbjct: 300 GLLTDPTVALDSISICMNYLNWDMQFMLGLSASTSVRVGNEL 341


>gb|AGC55236.1| TT12a [Gossypium arboreum]
          Length = 506

 Score =  119 bits (299), Expect = 2e-25
 Identities = 56/102 (54%), Positives = 75/102 (73%)
 Frame = -2

Query: 315 WLLVIITGLYIILSPSCQKT*TGFSAIAFKGLLFFLKLSVSSICMLSFELWYSMGLVLTV 136
           W LV+I GLYI+LSPSC++T +G S  AF G+  + KL+V+S  ML  E+WY+ GLVL  
Sbjct: 241 WFLVVINGLYIVLSPSCKETWSGLSFRAFTGIWPYFKLTVASAVMLCLEIWYNQGLVLIS 300

Query: 135 GYFANPIVSVASFSICLNCLNWDLMFMLGMSEAARIRVSIEL 10
           G  +NP +++ S SIC+N LNWD+ FMLG+S AA +RVS EL
Sbjct: 301 GLLSNPTIALDSISICMNYLNWDMQFMLGLSAAASVRVSNEL 342


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