BLASTX nr result

ID: Coptis23_contig00040608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040608
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002489123.1| hypothetical protein SORBIDRAFT_0020s002120 ...    71   1e-10
ref|XP_002488923.1| hypothetical protein SORBIDRAFT_1736s002010 ...    71   1e-10
ref|XP_002333722.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002338788.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_002336707.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10

>ref|XP_002489123.1| hypothetical protein SORBIDRAFT_0020s002120 [Sorghum bicolor]
           gi|241947264|gb|EES20409.1| hypothetical protein
           SORBIDRAFT_0020s002120 [Sorghum bicolor]
          Length = 501

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
 Frame = +1

Query: 4   YRVDIYNSAINFQLMKLKSRFTEETIELFTLSFALTPKDAFRSFKIDDICSLAERFY--- 174
           YR DI+  A++ Q  +L  RF+E+  EL TL  +L P D+F   KIDD+CSLA +FY   
Sbjct: 377 YRYDIFMVAVDQQAHELNCRFSEQATELLTLCTSLDPTDSFTKLKIDDVCSLASKFYPAD 436

Query: 175 ----FRVSVIKSYLY*ELSCSIMRLMFVVIQFSIYNMSMMFELCRRLVETGK 318
                R ++ +   + EL         V    S  N++ + ELCRRL ETGK
Sbjct: 437 FSEQERDTLRQQLQHYELD--------VPTNPSFQNLTTIAELCRRLAETGK 480


>ref|XP_002488923.1| hypothetical protein SORBIDRAFT_1736s002010 [Sorghum bicolor]
           gi|241947198|gb|EES20343.1| hypothetical protein
           SORBIDRAFT_1736s002010 [Sorghum bicolor]
          Length = 296

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
 Frame = +1

Query: 4   YRVDIYNSAINFQLMKLKSRFTEETIELFTLSFALTPKDAFRSFKIDDICSLAERFY--- 174
           YR DI+  A++ Q  +L  RF+E+  EL TL  +L P D+F   KIDD+CSLA +FY   
Sbjct: 185 YRYDIFMVAVDQQAHELNCRFSEQATELLTLCTSLDPTDSFTKLKIDDVCSLASKFYPAD 244

Query: 175 ----FRVSVIKSYLY*ELSCSIMRLMFVVIQFSIYNMSMMFELCRRLVETGK 318
                R ++ +   + EL         V    S  N++ + ELCRRL ETGK
Sbjct: 245 FSEQERDTLRQQLQHYELD--------VPTNPSFQNLTTIAELCRRLAETGK 288


>ref|XP_002333722.1| predicted protein [Populus trichocarpa] gi|222838364|gb|EEE76729.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
 Frame = +1

Query: 4   YRVDIYNSAINFQLMKLKSRFTEETIELFTLSFALTPKDAFRSFKIDDICSLAERFYFR- 180
           YRVDI+ + I+ QL +L +RF E+TIEL  LS AL PK+ ++ F ++DIC L ++FY   
Sbjct: 131 YRVDIFTAIIDQQLQELNNRFNEQTIELLKLSAALDPKNNYKLFSVEDICLLVDKFYPED 190

Query: 181 -VSVIKSYLY*ELSCSIMRLMFVVIQFSIYNMSMMFELCRRLVETGK 318
                K++L  +L       + V     + NMS + +LC+ LVET K
Sbjct: 191 FSDQEKTHLRFQLQ---HYELDVPNHPKLKNMSSISDLCQGLVETEK 234


>ref|XP_002338788.1| predicted protein [Populus trichocarpa] gi|222873463|gb|EEF10594.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/105 (37%), Positives = 61/105 (58%)
 Frame = +1

Query: 4   YRVDIYNSAINFQLMKLKSRFTEETIELFTLSFALTPKDAFRSFKIDDICSLAERFYFRV 183
           YRVDI+ + I+ QL +L +RF E+ IEL  LS AL P+++++ F ++DIC L ++FY   
Sbjct: 24  YRVDIFTAIIDQQLQELNNRFNEQAIELLKLSTALDPRNSYKLFNVEDICLLVDKFYPED 83

Query: 184 SVIKSYLY*ELSCSIMRLMFVVIQFSIYNMSMMFELCRRLVETGK 318
              +  ++         L  V     + NMS + +LC+ LVET K
Sbjct: 84  FSDQEKIHLRFQLQHYEL-DVPNHPKLKNMSSIADLCQGLVETEK 127


>ref|XP_002336707.1| predicted protein [Populus trichocarpa] gi|222836562|gb|EEE74969.1|
           predicted protein [Populus trichocarpa]
          Length = 740

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/105 (37%), Positives = 61/105 (58%)
 Frame = +1

Query: 4   YRVDIYNSAINFQLMKLKSRFTEETIELFTLSFALTPKDAFRSFKIDDICSLAERFYFRV 183
           YRVDI+ + I+ QL +L +RF E+ IEL  LS AL P+++++ F ++DIC L ++FY   
Sbjct: 555 YRVDIFTAIIDQQLQELNNRFNEQAIELLKLSTALDPRNSYKLFNVEDICLLVDKFYPED 614

Query: 184 SVIKSYLY*ELSCSIMRLMFVVIQFSIYNMSMMFELCRRLVETGK 318
              +  ++         L  V     + NMS + +LC+ LVET K
Sbjct: 615 FSDQEKIHLRFQLQHYEL-DVPNHPKLKNMSSIADLCQGLVETEK 658


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