BLASTX nr result

ID: Coptis23_contig00040604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040604
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308172.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
emb|CAN82440.1| hypothetical protein VITISV_006122 [Vitis vinifera]    62   4e-08
ref|XP_002302961.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
emb|CAN77614.1| hypothetical protein VITISV_035196 [Vitis vinifera]    61   1e-07
emb|CAN80718.1| hypothetical protein VITISV_004147 [Vitis vinifera]    60   1e-07

>ref|XP_002308172.1| predicted protein [Populus trichocarpa] gi|222854148|gb|EEE91695.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 28/78 (35%), Positives = 43/78 (55%)
 Frame = -3

Query: 238 CHLCGRDGESVNHVLLGCLFSWKIWSAFHLESRLSWVCPSQVASLFGSWDTGHFTLSGNR 59
           C +C  + ESV+H+LL C   W +WS       L+W CP  +A+LF  WD+  +     +
Sbjct: 385 CPICLAEEESVDHILLHCHKHWIVWSKIINWWGLAWCCPKNLAALFSQWDSLVYGKFQKK 444

Query: 58  LWSLLPFARMWGIWLEQN 5
            W +L F+  W +WL +N
Sbjct: 445 AWLMLLFSVAWSLWLHRN 462


>emb|CAN82440.1| hypothetical protein VITISV_006122 [Vitis vinifera]
          Length = 1030

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 24/79 (30%), Positives = 40/79 (50%)
 Frame = -3

Query: 238  CHLCGRDGESVNHVLLGCLFSWKIWSAFHLESRLSWVCPSQVASLFGSWDTGHFTLSGNR 59
            C+LCG + E++NH+L+ C  +  +W        + WV P+ V  +  SW +        +
Sbjct: 906  CYLCGCEEETINHMLIHCTVAKGLWDIIFALCGVQWVFPNSVKEVLSSWKSSFVGRKRKK 965

Query: 58   LWSLLPFARMWGIWLEQNR 2
            +W  +P    W IW E+NR
Sbjct: 966  VWKSIPLFIFWTIWKERNR 984


>ref|XP_002302961.1| predicted protein [Populus trichocarpa] gi|222844687|gb|EEE82234.1|
           predicted protein [Populus trichocarpa]
          Length = 406

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/78 (33%), Positives = 41/78 (52%)
 Frame = -3

Query: 238 CHLCGRDGESVNHVLLGCLFSWKIWSAFHLESRLSWVCPSQVASLFGSWDTGHFTLSGNR 59
           C +C  + E V+H+ + C   W IWS       L+W CP  +A+LF  WD+  +     +
Sbjct: 121 CPICLVEEEMVDHLFIHCYKHWLIWSKIINWCGLAWCCPRNLANLFSQWDSLVYGKFQKK 180

Query: 58  LWSLLPFARMWGIWLEQN 5
            W +L F+  W +WL +N
Sbjct: 181 AWVILFFSVAWSMWLLRN 198


>emb|CAN77614.1| hypothetical protein VITISV_035196 [Vitis vinifera]
          Length = 1522

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/79 (32%), Positives = 39/79 (49%)
 Frame = -3

Query: 238  CHLCGRDGESVNHVLLGCLFSWKIWSAFHLESRLSWVCPSQVASLFGSWDTGHFTLSGNR 59
            C LCG + E+VNH+LL C+    +W         +WV P +V  +  SW          R
Sbjct: 1398 CFLCGCEEENVNHILLHCIVVRALWEIVLALFGANWVFPERVKDMLVSWRGPFVGRKRKR 1457

Query: 58   LWSLLPFARMWGIWLEQNR 2
            +W+ +P    W +W E+NR
Sbjct: 1458 IWTSIPLCIFWTVWKERNR 1476


>emb|CAN80718.1| hypothetical protein VITISV_004147 [Vitis vinifera]
          Length = 403

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 24/79 (30%), Positives = 38/79 (48%)
 Frame = -3

Query: 238 CHLCGRDGESVNHVLLGCLFSWKIWSAFHLESRLSWVCPSQVASLFGSWDTGHFTLSGNR 59
           C LCG + E++NH+L+ C  +  +W        + WV P+ V  +  SW          +
Sbjct: 279 CFLCGCEEETINHILIHCTVAKGLWDIILALCGVQWVLPNSVKEVLSSWKGSFVGRKRKK 338

Query: 58  LWSLLPFARMWGIWLEQNR 2
           +W  +P    W IW E+NR
Sbjct: 339 VWKSIPLFIFWTIWKERNR 357


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