BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040582
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621264.1| Pentatricopeptide repeat-containing protein ...    80   2e-13
ref|XP_002517091.1| pentatricopeptide repeat-containing protein,...    79   5e-13
ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containi...    78   6e-13
ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containi...    78   6e-13
ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containi...    78   6e-13

>ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496279|gb|AES77482.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 519

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/79 (48%), Positives = 54/79 (68%)
 Frame = +1

Query: 1   GFLTSAKLLFDESVVKDVFSWTTIIDCYVQKSIPSVGLRIFNEMLRSGVVPNEVTMVAVL 180
           G + SA++LFDE+ VKDV SW  +I  YV   +    L +FNEM R+GV P+EVT++++L
Sbjct: 219 GEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLL 278

Query: 181 SACCVIGDLRLGRLVHGYI 237
           SAC  +GDL  G+ VH  +
Sbjct: 279 SACADLGDLENGKKVHAKV 297


>ref|XP_002517091.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543726|gb|EEF45254.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 606

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/81 (46%), Positives = 54/81 (66%)
 Frame = +1

Query: 1   GFLTSAKLLFDESVVKDVFSWTTIIDCYVQKSIPSVGLRIFNEMLRSGVVPNEVTMVAVL 180
           G L  A+ +FDE+  +DV SWT++ID Y      +  L++F+ ML S V PNEVTM++VL
Sbjct: 307 GCLVLARKVFDETPARDVVSWTSMIDGYSTHDYYTDALKLFDSMLLSDVEPNEVTMISVL 366

Query: 181 SACCVIGDLRLGRLVHGYIEK 243
           SAC   GDL LG+ +H Y+ +
Sbjct: 367 SACSQKGDLSLGKSIHEYVRR 387



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/78 (41%), Positives = 47/78 (60%)
 Frame = +1

Query: 1   GFLTSAKLLFDESVVKDVFSWTTIIDCYVQKSIPSVGLRIFNEMLRSGVVPNEVTMVAVL 180
           G L  A+  FD+   ++V SW  +I  Y Q + P   + +F+ M+  G++P E T+V VL
Sbjct: 439 GELEIARKFFDDMPKRNVVSWNAMIAGYSQNNQPKKAIVLFHHMVGEGLIPIENTLVCVL 498

Query: 181 SACCVIGDLRLGRLVHGY 234
           SAC  +G L LGRL+H Y
Sbjct: 499 SACGQLGYLDLGRLIHMY 516


>ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Cucumis sativus]
          Length = 600

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +1

Query: 1   GFLTSAKLLFDESVVKDVFSWTTIIDCYVQKSIPSVGLRIFNEMLRSGVVPNEVTMVAVL 180
           G + SA+LLF++   KD+ SWTT+I CY Q       L I++EM  +G++P+EVTM  V 
Sbjct: 249 GNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVA 308

Query: 181 SACCVIGDLRLGRLVHGYI 237
           SAC  IG L LG+ +H Y+
Sbjct: 309 SACAHIGALELGKEIHHYV 327


>ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Cucumis sativus]
          Length = 697

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +1

Query: 1   GFLTSAKLLFDESVVKDVFSWTTIIDCYVQKSIPSVGLRIFNEMLRSGVVPNEVTMVAVL 180
           G + SA+LLF++   KD+ SWTT+I CY Q       L I++EM  +G++P+EVTM  V 
Sbjct: 346 GNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVA 405

Query: 181 SACCVIGDLRLGRLVHGYI 237
           SAC  IG L LG+ +H Y+
Sbjct: 406 SACAHIGALELGKEIHHYV 424


>ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Glycine max]
          Length = 488

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 37/82 (45%), Positives = 54/82 (65%)
 Frame = +1

Query: 1   GFLTSAKLLFDESVVKDVFSWTTIIDCYVQKSIPSVGLRIFNEMLRSGVVPNEVTMVAVL 180
           G L  A+ +FDE   +DV SWT ++  Y Q   P   L +F EM RSGV P+EVTMV+++
Sbjct: 191 GELEVARRVFDEMPQRDVVSWTAMLTGYSQAKRPREALELFGEMRRSGVWPDEVTMVSLV 250

Query: 181 SACCVIGDLRLGRLVHGYIEKS 246
           SAC  +GD+  G +VH ++E++
Sbjct: 251 SACASLGDMETGMMVHRFVEEN 272