BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040550
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550050.1| PREDICTED: multiple RNA-binding domain-conta...    90   2e-16
emb|CBI26179.3| unnamed protein product [Vitis vinifera]               85   7e-15
ref|NP_197404.2| RNA recognition motif-containing protein [Arabi...    74   2e-11
ref|XP_002873925.1| predicted protein [Arabidopsis lyrata subsp....    71   8e-11
ref|XP_003556270.1| PREDICTED: uncharacterized protein LOC100791...    67   1e-09

>ref|XP_003550050.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           [Glycine max]
          Length = 160

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/77 (57%), Positives = 55/77 (71%)
 Frame = +1

Query: 4   LAKTFAHFGEVNRVKIIMDKKSIESLGFAYVWFTNEDAAQSAVKEMDGKFFCGRFIAVTI 183
           L K F+ FGEV  +++ +DK+S +SLGFAY+WF  E++AQ AV EM+GKFF GRFI VTI
Sbjct: 84  LMKVFSEFGEVTLIQLPIDKESGQSLGFAYIWFVKEESAQLAVLEMNGKFFYGRFIYVTI 143

Query: 184 AKPESPTSHTRTPQYTF 234
           AKP S  S  R   Y F
Sbjct: 144 AKPGSSKSSKRATAYKF 160


>emb|CBI26179.3| unnamed protein product [Vitis vinifera]
          Length = 156

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/77 (53%), Positives = 52/77 (67%)
 Frame = +1

Query: 4   LAKTFAHFGEVNRVKIIMDKKSIESLGFAYVWFTNEDAAQSAVKEMDGKFFCGRFIAVTI 183
           L K F+ FGEV++V+I  +K S + LGFA+ WFT E++AQ AVK MDGKFF GRF+ V I
Sbjct: 80  LKKAFSQFGEVSKVRIKRNKISSQPLGFAFAWFTTEESAQLAVKMMDGKFFHGRFVFVKI 139

Query: 184 AKPESPTSHTRTPQYTF 234
           AKP     H +   Y F
Sbjct: 140 AKPGPSKRHVKAAPYKF 156


>ref|NP_197404.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|332005259|gb|AED92642.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 172

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/77 (48%), Positives = 51/77 (66%)
 Frame = +1

Query: 4   LAKTFAHFGEVNRVKIIMDKKSIESLGFAYVWFTNEDAAQSAVKEMDGKFFCGRFIAVTI 183
           L K F+ FG+V  VKII ++++ +SLG+ YVWF +++ AQSAV+ M+GKFF GRFI V  
Sbjct: 93  LKKVFSEFGQVTNVKIIANERTRQSLGYGYVWFNSKEDAQSAVEAMNGKFFDGRFILVKF 152

Query: 184 AKPESPTSHTRTPQYTF 234
            +P    S  R P   F
Sbjct: 153 GQP--GLSRRRRPHSDF 167


>ref|XP_002873925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319762|gb|EFH50184.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 167

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/63 (50%), Positives = 46/63 (73%)
 Frame = +1

Query: 4   LAKTFAHFGEVNRVKIIMDKKSIESLGFAYVWFTNEDAAQSAVKEMDGKFFCGRFIAVTI 183
           L K F+ FG+V  VKII+++++ +SLG+ YVWF  ++ AQ AV+ M+GKFF GRFI V  
Sbjct: 91  LKKVFSEFGQVTNVKIIINERTRQSLGYGYVWFNRKEDAQLAVEAMNGKFFDGRFILVKF 150

Query: 184 AKP 192
            +P
Sbjct: 151 GQP 153


>ref|XP_003556270.1| PREDICTED: uncharacterized protein LOC100791652 [Glycine max]
          Length = 386

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/69 (49%), Positives = 44/69 (63%)
 Frame = +1

Query: 4   LAKTFAHFGEVNRVKIIMDKKSIESLGFAYVWFTNEDAAQSAVKEMDGKFFCGRFIAVTI 183
           L   F  FGE+  VK+IMDK S  S G+A+V +T E+AA +A+KEM+GK   G  I V +
Sbjct: 313 LRAAFEGFGELVEVKVIMDKISKRSKGYAFVEYTTEEAASAALKEMNGKIINGWMIVVDV 372

Query: 184 AKPESPTSH 210
           AKP  P  H
Sbjct: 373 AKPNPPRYH 381