BLASTX nr result

ID: Coptis23_contig00040542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040542
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266941.2| PREDICTED: uncharacterized protein LOC100263...    58   9e-07
ref|XP_003531461.1| PREDICTED: uncharacterized protein LOC100785...    58   9e-07
emb|CBI18662.3| unnamed protein product [Vitis vinifera]               58   9e-07
emb|CAN82512.1| hypothetical protein VITISV_002153 [Vitis vinifera]    58   9e-07
ref|XP_003595830.1| hypothetical protein MTR_2g062310 [Medicago ...    57   2e-06

>ref|XP_002266941.2| PREDICTED: uncharacterized protein LOC100263103 [Vitis vinifera]
          Length = 499

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/37 (64%), Positives = 28/37 (75%)
 Frame = -1

Query: 268 PVWEPHCSQCGKAFKPEKFHTHMKSCKGLKSFGNNRA 158
           PV  P CSQCGK+FKPEK HTHMKSC+G K+   + A
Sbjct: 438 PVATPSCSQCGKSFKPEKMHTHMKSCRGKKASAKSAA 474


>ref|XP_003531461.1| PREDICTED: uncharacterized protein LOC100785001 [Glycine max]
          Length = 423

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/35 (65%), Positives = 27/35 (77%)
 Frame = -1

Query: 268 PVWEPHCSQCGKAFKPEKFHTHMKSCKGLKSFGNN 164
           P   P CSQCGK+FKPEK H HMKSCKG+K+ G +
Sbjct: 366 PFGGPTCSQCGKSFKPEKMHKHMKSCKGMKALGKS 400


>emb|CBI18662.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/37 (64%), Positives = 28/37 (75%)
 Frame = -1

Query: 268 PVWEPHCSQCGKAFKPEKFHTHMKSCKGLKSFGNNRA 158
           PV  P CSQCGK+FKPEK HTHMKSC+G K+   + A
Sbjct: 303 PVATPSCSQCGKSFKPEKMHTHMKSCRGKKASAKSAA 339


>emb|CAN82512.1| hypothetical protein VITISV_002153 [Vitis vinifera]
          Length = 913

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/37 (64%), Positives = 28/37 (75%)
 Frame = -1

Query: 268 PVWEPHCSQCGKAFKPEKFHTHMKSCKGLKSFGNNRA 158
           PV  P CSQCGK+FKPEK HTHMKSC+G K+   + A
Sbjct: 852 PVATPSCSQCGKSFKPEKMHTHMKSCRGKKASAKSAA 888


>ref|XP_003595830.1| hypothetical protein MTR_2g062310 [Medicago truncatula]
           gi|124360103|gb|ABN08119.1| Protein of unknown function
           DUF966 [Medicago truncatula] gi|355484878|gb|AES66081.1|
           hypothetical protein MTR_2g062310 [Medicago truncatula]
          Length = 498

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 23/35 (65%), Positives = 26/35 (74%)
 Frame = -1

Query: 268 PVWEPHCSQCGKAFKPEKFHTHMKSCKGLKSFGNN 164
           P   P CSQCGK+FKPEK H HMKSCKG+K  G +
Sbjct: 440 PFGGPICSQCGKSFKPEKMHKHMKSCKGMKGMGTS 474


Top