BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040518
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522191.1| RING-H2 finger protein ATL1L, putative [Rici...   100   2e-19
ref|XP_002298709.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_002282494.1| PREDICTED: RING-H2 finger protein ATL78 [Vit...    93   5e-18
ref|XP_002331879.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_003523240.1| PREDICTED: RING-H2 finger protein ATL78-like...    91   1e-16

>ref|XP_002522191.1| RING-H2 finger protein ATL1L, putative [Ricinus communis]
           gi|223538562|gb|EEF40166.1| RING-H2 finger protein
           ATL1L, putative [Ricinus communis]
          Length = 223

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/80 (62%), Positives = 57/80 (71%)
 Frame = +2

Query: 53  YSRRLLLHTPLYSSTDKAXXXXXXXXXXXXXXYIGDSSFDANIVMILSVLLCALICALGL 232
           YSRRLLLHTPLY S   A              Y G++SFDAN+VM+LSVLLCALIC+LGL
Sbjct: 19  YSRRLLLHTPLYHSPTAAAPPAPGYSQEASEPYTGNNSFDANVVMVLSVLLCALICSLGL 78

Query: 233 NSIVRCALRCSRRVTSESSD 292
           NSI+RCALRCS  V S S+D
Sbjct: 79  NSIIRCALRCSSLVASRSAD 98


>ref|XP_002298709.1| predicted protein [Populus trichocarpa] gi|222845967|gb|EEE83514.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/79 (60%), Positives = 57/79 (72%)
 Frame = +2

Query: 53  YSRRLLLHTPLYSSTDKAXXXXXXXXXXXXXXYIGDSSFDANIVMILSVLLCALICALGL 232
           YSRRLLLHTPLY S++ A                 D+SFDAN+VM+LS+LLCALIC+LGL
Sbjct: 20  YSRRLLLHTPLYQSSNTATPPAPGNTASSETYTSTDNSFDANVVMVLSILLCALICSLGL 79

Query: 233 NSIVRCALRCSRRVTSESS 289
           NSI+RCALRCS  V SES+
Sbjct: 80  NSIIRCALRCSNLVASESA 98


>ref|XP_002282494.1| PREDICTED: RING-H2 finger protein ATL78 [Vitis vinifera]
           gi|147833208|emb|CAN75293.1| hypothetical protein
           VITISV_042413 [Vitis vinifera]
          Length = 224

 Score = 92.8 bits (229), Expect(2) = 5e-18
 Identities = 47/82 (57%), Positives = 55/82 (67%)
 Frame = +2

Query: 35  ELVHGLYSRRLLLHTPLYSSTDKAXXXXXXXXXXXXXXYIGDSSFDANIVMILSVLLCAL 214
           +LV   YSRRLLLH+PL+ S   A              Y G +SFD N+VM+LSVLLCAL
Sbjct: 14  DLVGDFYSRRLLLHSPLHESPATASPPATGNSHDSSEPYTGSNSFDTNVVMVLSVLLCAL 73

Query: 215 ICALGLNSIVRCALRCSRRVTS 280
           IC+LGLNSI+RCALRCS  V S
Sbjct: 74  ICSLGLNSIIRCALRCSSLVAS 95



 Score = 23.1 bits (48), Expect(2) = 5e-18
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 297 STRLANTGVK 326
           STRLANTGVK
Sbjct: 101 STRLANTGVK 110


>ref|XP_002331879.1| predicted protein [Populus trichocarpa] gi|222874628|gb|EEF11759.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/79 (60%), Positives = 54/79 (68%)
 Frame = +2

Query: 53  YSRRLLLHTPLYSSTDKAXXXXXXXXXXXXXXYIGDSSFDANIVMILSVLLCALICALGL 232
           YSRRLLLH PLY ST+ A                  SSFDAN+VM+LSVLLCALIC+LGL
Sbjct: 19  YSRRLLLHNPLYQSTNTATPPAPGNSAPSEPSTGTGSSFDANVVMVLSVLLCALICSLGL 78

Query: 233 NSIVRCALRCSRRVTSESS 289
           NSI+RCALRCS    SES+
Sbjct: 79  NSIIRCALRCSNIAASESA 97


>ref|XP_003523240.1| PREDICTED: RING-H2 finger protein ATL78-like [Glycine max]
          Length = 239

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 48/87 (55%), Positives = 60/87 (68%), Gaps = 4/87 (4%)
 Frame = +2

Query: 38  LVHGL----YSRRLLLHTPLYSSTDKAXXXXXXXXXXXXXXYIGDSSFDANIVMILSVLL 205
           L+H L    YSRRLLLH+P  + ++K               Y+GD +FDAN+VM+LSVLL
Sbjct: 13  LLHDLENFHYSRRLLLHSPYLNQSEKPPTSSHDSTET----YLGDGNFDANVVMVLSVLL 68

Query: 206 CALICALGLNSIVRCALRCSRRVTSES 286
           CALIC+LGLNSI+RCALRCS  V S+S
Sbjct: 69  CALICSLGLNSIIRCALRCSNFVVSDS 95