BLASTX nr result

ID: Coptis23_contig00040512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040512
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266664.2| PREDICTED: LOW QUALITY PROTEIN: GATA transcr...    92   4e-17
ref|XP_002521591.1| GATA transcription factor, putative [Ricinus...    92   6e-17
emb|CAN72981.1| hypothetical protein VITISV_009032 [Vitis vinifera]    91   7e-17
ref|XP_002310237.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_003548888.1| PREDICTED: GATA transcription factor 18-like...    84   1e-14

>ref|XP_002266664.2| PREDICTED: LOW QUALITY PROTEIN: GATA transcription factor 18-like
           [Vitis vinifera]
          Length = 294

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 55/119 (46%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
 Frame = +2

Query: 2   DEVDAYSF--NSSSSVDCTLSLGTPSTRQSNNNFVDHQHXXXXXXXXXXXXXXXWDIFQT 175
           DE D Y F  +SSSSVDCTLSLGTPSTR ++N   D +                WDI Q+
Sbjct: 85  DETDMYPFTSSSSSSVDCTLSLGTPSTRLTDN---DEKRMHHDRRAGSCVSNFCWDILQS 141

Query: 176 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRCANCDTTSTPLWRNGPRGPKSLCN 352
                                           ARRCANCDTTSTPLWRNGPRGPKSLCN
Sbjct: 142 KHTPSAPTHKPSRGGSSGSSSNNSAGDPLL--ARRCANCDTTSTPLWRNGPRGPKSLCN 198


>ref|XP_002521591.1| GATA transcription factor, putative [Ricinus communis]
           gi|223539269|gb|EEF40862.1| GATA transcription factor,
           putative [Ricinus communis]
          Length = 332

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 54/122 (44%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
 Frame = +2

Query: 2   DEVDAYSF-----NSSSSVDCTLSLGTPSTRQSNNNFVDHQHXXXXXXXXXXXXXXXWDI 166
           DE D Y F     +SSSSVDCTLSLGTPSTR   ++  D +                WDI
Sbjct: 121 DETDMYPFPSSSSSSSSSVDCTLSLGTPSTRLCEDD--DKRSICHDRRPTSCMSNFCWDI 178

Query: 167 FQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRCANCDTTSTPLWRNGPRGPKSL 346
            Q                                 ARRCANCDTTSTPLWRNGPRGPKSL
Sbjct: 179 LQNKNTPYSPQNHKTTARGSNTTTNSNSANNDPLLARRCANCDTTSTPLWRNGPRGPKSL 238

Query: 347 CN 352
           CN
Sbjct: 239 CN 240


>emb|CAN72981.1| hypothetical protein VITISV_009032 [Vitis vinifera]
          Length = 324

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 55/119 (46%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
 Frame = +2

Query: 2   DEVDAYSF--NSSSSVDCTLSLGTPSTRQSNNNFVDHQHXXXXXXXXXXXXXXXWDIFQT 175
           DE D Y F  +SSSSVDCTLSLGTPSTR ++N   D +                WDI Q 
Sbjct: 115 DETDMYPFTSSSSSSVDCTLSLGTPSTRLTDN---DEKRMHHDRRAGSCVSNFCWDILQX 171

Query: 176 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRCANCDTTSTPLWRNGPRGPKSLCN 352
                                           ARRCANCDTTSTPLWRNGPRGPKSLCN
Sbjct: 172 KHTPSAPTHKPSRGGSSGSSSNNSAGDPLL--ARRCANCDTTSTPLWRNGPRGPKSLCN 228


>ref|XP_002310237.1| predicted protein [Populus trichocarpa] gi|222853140|gb|EEE90687.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 55/122 (45%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
 Frame = +2

Query: 2   DEVDAYSFNS-SSSVDCTLSLGTPSTRQSNNNFVDHQHXXXXXXXXXXXXXXXWDIFQTX 178
           DE D Y   S SSSVDCTLSLGTPSTR S ++    +H               WDI QT 
Sbjct: 41  DETDMYPVTSPSSSVDCTLSLGTPSTRLSEDDEKRMRHDQRRSGSCMSNFC--WDILQTK 98

Query: 179 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----ARRCANCDTTSTPLWRNGPRGPKSL 346
                                              ARRCANCDTTSTPLWRNGPRGPKSL
Sbjct: 99  NNSTPYPPQAHKTSRGSSNSSHNSNNNLANNDPLLARRCANCDTTSTPLWRNGPRGPKSL 158

Query: 347 CN 352
           CN
Sbjct: 159 CN 160


>ref|XP_003548888.1| PREDICTED: GATA transcription factor 18-like [Glycine max]
          Length = 251

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 50/118 (42%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
 Frame = +2

Query: 5   EVDAYSF--NSSSSVDCTLSLGTPSTRQSNNNFVDHQHXXXXXXXXXXXXXXXWDIFQTX 178
           E D YS    S SSVDCTLSLGTPSTR + ++  D+ +               WD+  + 
Sbjct: 41  EYDMYSSFTPSPSSVDCTLSLGTPSTRLTQDDDHDNDNKRHPHQRRSGVANFCWDLLHSK 100

Query: 179 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRCANCDTTSTPLWRNGPRGPKSLCN 352
                                          ARRCANCDTTSTPLWRNGPRGPKSLCN
Sbjct: 101 HNNNNTQSQSKSSSRGSSSNNNNNNDPLL--ARRCANCDTTSTPLWRNGPRGPKSLCN 156


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