BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040511
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31981.3| unnamed protein product [Vitis vinifera]              143   1e-32
ref|XP_002271313.1| PREDICTED: pentatricopeptide repeat-containi...   143   1e-32
ref|XP_004158148.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27
ref|XP_004143729.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27
ref|XP_003593920.1| Pentatricopeptide repeat-containing protein ...   119   2e-25

>emb|CBI31981.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/92 (73%), Positives = 79/92 (85%)
 Frame = -2

Query: 276 GKLYFEKMIRVYGFSPGIAHYGCMIDLLGRAGLLEEAYDLIKSLPIERDTTAWRALLAAC 97
           G  + EKM+R YGFSP + HYGCMIDLLGRAGLLEEA++LIKSLPIE D T WRALLAAC
Sbjct: 411 GISFLEKMVREYGFSPKVEHYGCMIDLLGRAGLLEEAHNLIKSLPIEGDATGWRALLAAC 470

Query: 96  RVHGHVELGETARRTLMELNDEHPTDSILLSS 1
           RV+G+V+LGE  +R L+E+ DEHPTDSILLSS
Sbjct: 471 RVYGNVDLGECVKRVLLEIFDEHPTDSILLSS 502


>ref|XP_002271313.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Vitis vinifera]
          Length = 597

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/92 (73%), Positives = 79/92 (85%)
 Frame = -2

Query: 276 GKLYFEKMIRVYGFSPGIAHYGCMIDLLGRAGLLEEAYDLIKSLPIERDTTAWRALLAAC 97
           G  + EKM+R YGFSP + HYGCMIDLLGRAGLLEEA++LIKSLPIE D T WRALLAAC
Sbjct: 450 GISFLEKMVREYGFSPKVEHYGCMIDLLGRAGLLEEAHNLIKSLPIEGDATGWRALLAAC 509

Query: 96  RVHGHVELGETARRTLMELNDEHPTDSILLSS 1
           RV+G+V+LGE  +R L+E+ DEHPTDSILLSS
Sbjct: 510 RVYGNVDLGECVKRVLLEIFDEHPTDSILLSS 541


>ref|XP_004158148.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Cucumis sativus]
          Length = 556

 Score =  126 bits (316), Expect = 2e-27
 Identities = 62/93 (66%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
 Frame = -2

Query: 276 GKLYFEKMIRVYGFSPGIAHYGCMIDLLGRAGLLEEAYDLIKSLPIER-DTTAWRALLAA 100
           G   F++M+  YG +P I HYGC+IDLLGRAGLLEEA+ LIKSLP  + D T WR LLAA
Sbjct: 412 GMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLLEEAHKLIKSLPSTKGDITGWRTLLAA 471

Query: 99  CRVHGHVELGETARRTLMELNDEHPTDSILLSS 1
           CRV+G VELGET +R L++LNDEHP DS+LLSS
Sbjct: 472 CRVYGDVELGETVKRKLVDLNDEHPADSMLLSS 504


>ref|XP_004143729.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Cucumis sativus]
          Length = 591

 Score =  126 bits (316), Expect = 2e-27
 Identities = 62/93 (66%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
 Frame = -2

Query: 276 GKLYFEKMIRVYGFSPGIAHYGCMIDLLGRAGLLEEAYDLIKSLPIER-DTTAWRALLAA 100
           G   F++M+  YG +P I HYGC+IDLLGRAGLLEEA+ LIKSLP  + D T WR LLAA
Sbjct: 447 GMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLLEEAHKLIKSLPSTKGDITGWRTLLAA 506

Query: 99  CRVHGHVELGETARRTLMELNDEHPTDSILLSS 1
           CRV+G VELGET +R L++LNDEHP DS+LLSS
Sbjct: 507 CRVYGDVELGETVKRKLVDLNDEHPADSMLLSS 539


>ref|XP_003593920.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482968|gb|AES64171.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 801

 Score =  119 bits (299), Expect = 2e-25
 Identities = 53/91 (58%), Positives = 71/91 (78%)
 Frame = -2

Query: 276 GKLYFEKMIRVYGFSPGIAHYGCMIDLLGRAGLLEEAYDLIKSLPIERDTTAWRALLAAC 97
           G  +F++M++ +GFSP + HYGC+IDLLGRAG+L EA++LIKSLPI+ D T+WR LL+AC
Sbjct: 432 GVEFFKRMVQEHGFSPWVEHYGCLIDLLGRAGMLHEAFELIKSLPIKGDATSWRTLLSAC 491

Query: 96  RVHGHVELGETARRTLMELNDEHPTDSILLS 4
           RVHG V+LGE  +  L      HPTDS+L+S
Sbjct: 492 RVHGDVKLGECVKDVLSNFYTPHPTDSLLIS 522