BLASTX nr result
ID: Coptis23_contig00040490
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00040490 (251 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003516535.1| PREDICTED: uncharacterized protein LOC100799... 57 2e-06 ref|XP_002305551.1| predicted protein [Populus trichocarpa] gi|2... 55 4e-06 ref|XP_003538898.1| PREDICTED: uncharacterized protein LOC100816... 55 8e-06 ref|XP_003635507.1| PREDICTED: uncharacterized protein LOC100852... 54 1e-05 ref|XP_003635530.1| PREDICTED: uncharacterized protein LOC100853... 54 1e-05 >ref|XP_003516535.1| PREDICTED: uncharacterized protein LOC100799114 [Glycine max] Length = 317 Score = 56.6 bits (135), Expect = 2e-06 Identities = 27/65 (41%), Positives = 45/65 (69%) Frame = -3 Query: 243 LEELDVALFNIVSKKTSKGIEVMNVVQDVQKQLDMIMSSMQGLDKGLECMYKSIIKTRVS 64 LE++D+AL +V +K E N+ Q QK+L+ ++ ++GL+ GL+C++K +I TRVS Sbjct: 248 LEKVDLALCRMVMDNATKDFEAENI-QFAQKELEAVVVVIEGLENGLDCLFKHLINTRVS 306 Query: 63 LLNIM 49 LNI+ Sbjct: 307 FLNIV 311 >ref|XP_002305551.1| predicted protein [Populus trichocarpa] gi|222848515|gb|EEE86062.1| predicted protein [Populus trichocarpa] Length = 289 Score = 55.5 bits (132), Expect = 4e-06 Identities = 28/63 (44%), Positives = 44/63 (69%) Frame = -3 Query: 237 ELDVALFNIVSKKTSKGIEVMNVVQDVQKQLDMIMSSMQGLDKGLECMYKSIIKTRVSLL 58 E+D AL +V +TSK + ++ VQ QL+ + +Q L++GLEC+++ +IKTRVSLL Sbjct: 229 EMDAALIGLVEHRTSKS----DNIKVVQSQLENLELCIQDLEEGLECLFRHLIKTRVSLL 284 Query: 57 NIM 49 NI+ Sbjct: 285 NIL 287 >ref|XP_003538898.1| PREDICTED: uncharacterized protein LOC100816620 [Glycine max] Length = 317 Score = 54.7 bits (130), Expect = 8e-06 Identities = 26/65 (40%), Positives = 44/65 (67%) Frame = -3 Query: 243 LEELDVALFNIVSKKTSKGIEVMNVVQDVQKQLDMIMSSMQGLDKGLECMYKSIIKTRVS 64 LE++D+AL +V +K E N+ Q K+L+ ++ ++GL+ GL+C++K +I TRVS Sbjct: 248 LEKVDLALCRMVMDNATKDFEAENI-QFAHKELEAVVVVIEGLENGLDCLFKHLINTRVS 306 Query: 63 LLNIM 49 LNI+ Sbjct: 307 FLNIV 311 >ref|XP_003635507.1| PREDICTED: uncharacterized protein LOC100852615 [Vitis vinifera] Length = 302 Score = 54.3 bits (129), Expect = 1e-05 Identities = 26/65 (40%), Positives = 45/65 (69%) Frame = -3 Query: 243 LEELDVALFNIVSKKTSKGIEVMNVVQDVQKQLDMIMSSMQGLDKGLECMYKSIIKTRVS 64 LE +D+A+ N++ + SK E + Q K+L+ + S++GL+ GL C+++ +I+TRVS Sbjct: 237 LESVDIAVSNLLVQNPSKDPEAEKI-QSAHKRLEALDMSIEGLENGLGCLFRRLIQTRVS 295 Query: 63 LLNIM 49 LLNI+ Sbjct: 296 LLNIL 300 >ref|XP_003635530.1| PREDICTED: uncharacterized protein LOC100853887 [Vitis vinifera] Length = 302 Score = 54.3 bits (129), Expect = 1e-05 Identities = 26/65 (40%), Positives = 45/65 (69%) Frame = -3 Query: 243 LEELDVALFNIVSKKTSKGIEVMNVVQDVQKQLDMIMSSMQGLDKGLECMYKSIIKTRVS 64 LE +D+A+ N++ + SK E + Q K+L+ + S++GL+ GL C+++ +I+TRVS Sbjct: 237 LESVDIAVCNLLVQNPSKDPEAEKI-QSAHKRLEALDMSIEGLENGLGCLFRRLIQTRVS 295 Query: 63 LLNIM 49 LLNI+ Sbjct: 296 LLNIL 300