BLASTX nr result

ID: Coptis23_contig00040490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040490
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516535.1| PREDICTED: uncharacterized protein LOC100799...    57   2e-06
ref|XP_002305551.1| predicted protein [Populus trichocarpa] gi|2...    55   4e-06
ref|XP_003538898.1| PREDICTED: uncharacterized protein LOC100816...    55   8e-06
ref|XP_003635507.1| PREDICTED: uncharacterized protein LOC100852...    54   1e-05
ref|XP_003635530.1| PREDICTED: uncharacterized protein LOC100853...    54   1e-05

>ref|XP_003516535.1| PREDICTED: uncharacterized protein LOC100799114 [Glycine max]
          Length = 317

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/65 (41%), Positives = 45/65 (69%)
 Frame = -3

Query: 243 LEELDVALFNIVSKKTSKGIEVMNVVQDVQKQLDMIMSSMQGLDKGLECMYKSIIKTRVS 64
           LE++D+AL  +V    +K  E  N+ Q  QK+L+ ++  ++GL+ GL+C++K +I TRVS
Sbjct: 248 LEKVDLALCRMVMDNATKDFEAENI-QFAQKELEAVVVVIEGLENGLDCLFKHLINTRVS 306

Query: 63  LLNIM 49
            LNI+
Sbjct: 307 FLNIV 311


>ref|XP_002305551.1| predicted protein [Populus trichocarpa] gi|222848515|gb|EEE86062.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 28/63 (44%), Positives = 44/63 (69%)
 Frame = -3

Query: 237 ELDVALFNIVSKKTSKGIEVMNVVQDVQKQLDMIMSSMQGLDKGLECMYKSIIKTRVSLL 58
           E+D AL  +V  +TSK     + ++ VQ QL+ +   +Q L++GLEC+++ +IKTRVSLL
Sbjct: 229 EMDAALIGLVEHRTSKS----DNIKVVQSQLENLELCIQDLEEGLECLFRHLIKTRVSLL 284

Query: 57  NIM 49
           NI+
Sbjct: 285 NIL 287


>ref|XP_003538898.1| PREDICTED: uncharacterized protein LOC100816620 [Glycine max]
          Length = 317

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/65 (40%), Positives = 44/65 (67%)
 Frame = -3

Query: 243 LEELDVALFNIVSKKTSKGIEVMNVVQDVQKQLDMIMSSMQGLDKGLECMYKSIIKTRVS 64
           LE++D+AL  +V    +K  E  N+ Q   K+L+ ++  ++GL+ GL+C++K +I TRVS
Sbjct: 248 LEKVDLALCRMVMDNATKDFEAENI-QFAHKELEAVVVVIEGLENGLDCLFKHLINTRVS 306

Query: 63  LLNIM 49
            LNI+
Sbjct: 307 FLNIV 311


>ref|XP_003635507.1| PREDICTED: uncharacterized protein LOC100852615 [Vitis vinifera]
          Length = 302

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 26/65 (40%), Positives = 45/65 (69%)
 Frame = -3

Query: 243 LEELDVALFNIVSKKTSKGIEVMNVVQDVQKQLDMIMSSMQGLDKGLECMYKSIIKTRVS 64
           LE +D+A+ N++ +  SK  E   + Q   K+L+ +  S++GL+ GL C+++ +I+TRVS
Sbjct: 237 LESVDIAVSNLLVQNPSKDPEAEKI-QSAHKRLEALDMSIEGLENGLGCLFRRLIQTRVS 295

Query: 63  LLNIM 49
           LLNI+
Sbjct: 296 LLNIL 300


>ref|XP_003635530.1| PREDICTED: uncharacterized protein LOC100853887 [Vitis vinifera]
          Length = 302

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 26/65 (40%), Positives = 45/65 (69%)
 Frame = -3

Query: 243 LEELDVALFNIVSKKTSKGIEVMNVVQDVQKQLDMIMSSMQGLDKGLECMYKSIIKTRVS 64
           LE +D+A+ N++ +  SK  E   + Q   K+L+ +  S++GL+ GL C+++ +I+TRVS
Sbjct: 237 LESVDIAVCNLLVQNPSKDPEAEKI-QSAHKRLEALDMSIEGLENGLGCLFRRLIQTRVS 295

Query: 63  LLNIM 49
           LLNI+
Sbjct: 296 LLNIL 300


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