BLASTX nr result

ID: Coptis23_contig00040488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040488
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522369.1| conserved hypothetical protein [Ricinus comm...   149   2e-34
ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
emb|CBI32505.3| unnamed protein product [Vitis vinifera]              142   3e-32
ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein ...   142   3e-32
ref|XP_004159134.1| PREDICTED: uncharacterized membrane protein ...   128   4e-28

>ref|XP_002522369.1| conserved hypothetical protein [Ricinus communis]
           gi|223538447|gb|EEF40053.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 550

 Score =  149 bits (376), Expect = 2e-34
 Identities = 64/92 (69%), Positives = 82/92 (89%)
 Frame = -3

Query: 277 AVLGVVLDIPLITLIVIYKAPIMLFKGWHRLVEDLVGRSGPFLETVCVPFAGLLIVLWPF 98
           A L +++D+P+IT+IV+YKAPI+LFKGWHRL++DL+GR+GPF ETVC+PFAG  I+LWP 
Sbjct: 190 ACLAILVDVPVITIIVVYKAPILLFKGWHRLIQDLIGRAGPFFETVCIPFAGFWILLWPI 249

Query: 97  AVVLAVLVGIMSSLGFGCYAAVVAYQESSTKK 2
            V+LA L GI+SS GFGCYAAVVAYQE+STK+
Sbjct: 250 VVLLATLAGIVSSFGFGCYAAVVAYQENSTKR 281


>ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|222853077|gb|EEE90624.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  145 bits (365), Expect = 4e-33
 Identities = 64/92 (69%), Positives = 82/92 (89%)
 Frame = -3

Query: 277 AVLGVVLDIPLITLIVIYKAPIMLFKGWHRLVEDLVGRSGPFLETVCVPFAGLLIVLWPF 98
           A+LG+V+D+ +IT+IV+ KAP+ML KGWHRL++DL+GR GPFLETVCVPFA L I+LWP 
Sbjct: 189 AILGIVVDVHVITMIVLLKAPLMLLKGWHRLIQDLIGREGPFLETVCVPFASLWILLWPI 248

Query: 97  AVVLAVLVGIMSSLGFGCYAAVVAYQESSTKK 2
            V+LA+  GI+SSLGFGC+AAVVAYQE+STK+
Sbjct: 249 MVLLAIAAGIISSLGFGCFAAVVAYQENSTKR 280


>emb|CBI32505.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score =  142 bits (358), Expect = 3e-32
 Identities = 63/92 (68%), Positives = 80/92 (86%)
 Frame = -3

Query: 277 AVLGVVLDIPLITLIVIYKAPIMLFKGWHRLVEDLVGRSGPFLETVCVPFAGLLIVLWPF 98
           A+LGV++D+P ITLIV+YK+PI+LFKGW++L+ DL+GR GPF ET+CVPFAGLLI+LWP 
Sbjct: 190 AILGVLVDVPFITLIVLYKSPILLFKGWNQLLHDLIGREGPFFETICVPFAGLLILLWPI 249

Query: 97  AVVLAVLVGIMSSLGFGCYAAVVAYQESSTKK 2
            VVLA L G++SS  FGC AAV+AYQESS K+
Sbjct: 250 VVVLAALAGVISSFFFGCCAAVIAYQESSIKR 281


>ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Vitis
           vinifera]
          Length = 547

 Score =  142 bits (358), Expect = 3e-32
 Identities = 63/92 (68%), Positives = 80/92 (86%)
 Frame = -3

Query: 277 AVLGVVLDIPLITLIVIYKAPIMLFKGWHRLVEDLVGRSGPFLETVCVPFAGLLIVLWPF 98
           A+LGV++D+P ITLIV+YK+PI+LFKGW++L+ DL+GR GPF ET+CVPFAGLLI+LWP 
Sbjct: 190 AILGVLVDVPFITLIVLYKSPILLFKGWNQLLHDLIGREGPFFETICVPFAGLLILLWPI 249

Query: 97  AVVLAVLVGIMSSLGFGCYAAVVAYQESSTKK 2
            VVLA L G++SS  FGC AAV+AYQESS K+
Sbjct: 250 VVVLAALAGVISSFFFGCCAAVIAYQESSIKR 281


>ref|XP_004159134.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Cucumis
           sativus]
          Length = 589

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/88 (67%), Positives = 73/88 (82%)
 Frame = -3

Query: 274 VLGVVLDIPLITLIVIYKAPIMLFKGWHRLVEDLVGRSGPFLETVCVPFAGLLIVLWPFA 95
           +LG+V+D+ +I+ I I+K+PIMLFKGWHRL  DL+GR GPFLET+CVPFAGL+I+LWP A
Sbjct: 191 ILGIVVDVFMISFIAIFKSPIMLFKGWHRLFNDLIGREGPFLETICVPFAGLIILLWPLA 250

Query: 94  VVLAVLVGIMSSLGFGCYAAVVAYQESS 11
           VV +VL  I SSL  G YA +VAYQESS
Sbjct: 251 VVGSVLGSIASSLFLGAYAGIVAYQESS 278


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