BLASTX nr result
ID: Coptis23_contig00040478
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00040478
(403 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI26947.3| unnamed protein product [Vitis vinifera] 208 4e-52
ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containi... 208 4e-52
ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containi... 188 3e-46
ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 188 5e-46
ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 188 5e-46
>emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 208 bits (529), Expect = 4e-52
Identities = 95/133 (71%), Positives = 118/133 (88%)
Frame = +1
Query: 4 MLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHA 183
+LQKMV+DG++PD++ YTSIIH H NG+L++ R++F EMLS+GL+PSVVTYTVLIHGHA
Sbjct: 536 LLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHA 595
Query: 184 VKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKY 363
KGRL AF YFSEMQEKG+LPNVITYN++INGLC++RR++QAY F EM EKG+ PNKY
Sbjct: 596 GKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKY 655
Query: 364 SYTLLINENCNVG 402
SYT+LINENCN+G
Sbjct: 656 SYTILINENCNMG 668
Score = 94.4 bits (233), Expect = 9e-18
Identities = 46/131 (35%), Positives = 75/131 (57%)
Frame = +1
Query: 10 QKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHAVK 189
++MV G P Y S I+ G++ +A Q +ML+ L P VV+Y LI+G+
Sbjct: 328 EEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRL 387
Query: 190 GRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKYSY 369
G L AF F E++ + P ++TYN +++GLC +E A +L EM +G+ P+ +Y
Sbjct: 388 GNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTY 447
Query: 370 TLLINENCNVG 402
T+L+N +C +G
Sbjct: 448 TILVNGSCKMG 458
Score = 90.9 bits (224), Expect = 1e-16
Identities = 47/132 (35%), Positives = 77/132 (58%)
Frame = +1
Query: 7 LQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHAV 186
L M+A+ L+PD + Y ++I+ + G L +A +FDE+ S L P++VTY L+ G
Sbjct: 362 LSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCR 421
Query: 187 KGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKYS 366
+G L +A + EM +G+ P+++TY ++NG C+M + A E FDEM +GL + Y+
Sbjct: 422 QGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYA 481
Query: 367 YTLLINENCNVG 402
Y I +G
Sbjct: 482 YATRIVGELKLG 493
Score = 87.8 bits (216), Expect = 8e-16
Identities = 44/130 (33%), Positives = 73/130 (56%)
Frame = +1
Query: 13 KMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHAVKG 192
+M+ +G+ PD + YT +++ G L A++ FDEML +GL Y I G G
Sbjct: 434 EMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLG 493
Query: 193 RLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKYSYT 372
+ AF EM KG P++I YN +++GLC++ +E+A EL +M G++P+ +YT
Sbjct: 494 DTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYT 553
Query: 373 LLINENCNVG 402
+I+ + G
Sbjct: 554 SIIHAHLENG 563
Score = 87.0 bits (214), Expect = 1e-15
Identities = 48/133 (36%), Positives = 70/133 (52%)
Frame = +1
Query: 4 MLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHA 183
+L +M G P+ + Y +I+ G+ ++A+ + EML GL S TY LI+G+
Sbjct: 256 LLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYF 315
Query: 184 VKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKY 363
KG LA A EM KG P V TYN+ I GLC++ R+ A + +M L+P+
Sbjct: 316 NKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVV 375
Query: 364 SYTLLINENCNVG 402
SY LI C +G
Sbjct: 376 SYNTLIYGYCRLG 388
Score = 86.3 bits (212), Expect = 2e-15
Identities = 44/133 (33%), Positives = 74/133 (55%)
Frame = +1
Query: 4 MLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHA 183
++ +M+ GL Y +I+ +F G L EA + +EM+ +G SP+V TY I+G
Sbjct: 291 LIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLC 350
Query: 184 VKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKY 363
GR++ A + S+M +LP+V++YN +I G C + + +A+ LFDE+ L P
Sbjct: 351 KLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIV 410
Query: 364 SYTLLINENCNVG 402
+Y L++ C G
Sbjct: 411 TYNTLLDGLCRQG 423
Score = 75.1 bits (183), Expect = 6e-12
Identities = 44/133 (33%), Positives = 65/133 (48%)
Frame = +1
Query: 4 MLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHA 183
+ KM+ L PD I+ + +A +V+ M G+ P++VTY L+ +
Sbjct: 186 VFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYC 245
Query: 184 VKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKY 363
G++ SEMQ +G PN +TYN +INGL + EQA L EM + GL + Y
Sbjct: 246 KGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAY 305
Query: 364 SYTLLINENCNVG 402
+Y LI N G
Sbjct: 306 TYNPLIYGYFNKG 318
Score = 74.7 bits (182), Expect = 7e-12
Identities = 41/130 (31%), Positives = 69/130 (53%)
Frame = +1
Query: 13 KMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHAVKG 192
+M+ +GL D Y + I G A + +EML++G P ++ Y V++ G G
Sbjct: 469 EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 528
Query: 193 RLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKYSYT 372
L A + +M GV+P+ +TY ++I+ E R+ + E+F EM KGL P+ +YT
Sbjct: 529 NLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYT 588
Query: 373 LLINENCNVG 402
+LI+ + G
Sbjct: 589 VLIHGHAGKG 598
Score = 66.2 bits (160), Expect = 3e-09
Identities = 30/108 (27%), Positives = 58/108 (53%)
Frame = +1
Query: 61 IIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHAVKGRLALAFKYFSEMQEKG 240
+I + +++ VFD+M+ LSP V ++ K ++ A + + M E G
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229
Query: 241 VLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKYSYTLLIN 384
+ P ++TYN +++ C+ +++Q +L EM+ +G PN +Y +LIN
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLIN 277
>ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 208 bits (529), Expect = 4e-52
Identities = 95/133 (71%), Positives = 118/133 (88%)
Frame = +1
Query: 4 MLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHA 183
+LQKMV+DG++PD++ YTSIIH H NG+L++ R++F EMLS+GL+PSVVTYTVLIHGHA
Sbjct: 536 LLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHA 595
Query: 184 VKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKY 363
KGRL AF YFSEMQEKG+LPNVITYN++INGLC++RR++QAY F EM EKG+ PNKY
Sbjct: 596 GKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKY 655
Query: 364 SYTLLINENCNVG 402
SYT+LINENCN+G
Sbjct: 656 SYTILINENCNMG 668
Score = 94.4 bits (233), Expect = 9e-18
Identities = 46/131 (35%), Positives = 75/131 (57%)
Frame = +1
Query: 10 QKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHAVK 189
++MV G P Y S I+ G++ +A Q +ML+ L P VV+Y LI+G+
Sbjct: 328 EEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRL 387
Query: 190 GRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKYSY 369
G L AF F E++ + P ++TYN +++GLC +E A +L EM +G+ P+ +Y
Sbjct: 388 GNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTY 447
Query: 370 TLLINENCNVG 402
T+L+N +C +G
Sbjct: 448 TILVNGSCKMG 458
Score = 90.9 bits (224), Expect = 1e-16
Identities = 47/132 (35%), Positives = 77/132 (58%)
Frame = +1
Query: 7 LQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHAV 186
L M+A+ L+PD + Y ++I+ + G L +A +FDE+ S L P++VTY L+ G
Sbjct: 362 LSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCR 421
Query: 187 KGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKYS 366
+G L +A + EM +G+ P+++TY ++NG C+M + A E FDEM +GL + Y+
Sbjct: 422 QGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYA 481
Query: 367 YTLLINENCNVG 402
Y I +G
Sbjct: 482 YATRIVGELKLG 493
Score = 87.8 bits (216), Expect = 8e-16
Identities = 44/130 (33%), Positives = 73/130 (56%)
Frame = +1
Query: 13 KMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHAVKG 192
+M+ +G+ PD + YT +++ G L A++ FDEML +GL Y I G G
Sbjct: 434 EMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLG 493
Query: 193 RLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKYSYT 372
+ AF EM KG P++I YN +++GLC++ +E+A EL +M G++P+ +YT
Sbjct: 494 DTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYT 553
Query: 373 LLINENCNVG 402
+I+ + G
Sbjct: 554 SIIHAHLENG 563
Score = 87.0 bits (214), Expect = 1e-15
Identities = 48/133 (36%), Positives = 70/133 (52%)
Frame = +1
Query: 4 MLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHA 183
+L +M G P+ + Y +I+ G+ ++A+ + EML GL S TY LI+G+
Sbjct: 256 LLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYF 315
Query: 184 VKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKY 363
KG LA A EM KG P V TYN+ I GLC++ R+ A + +M L+P+
Sbjct: 316 NKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVV 375
Query: 364 SYTLLINENCNVG 402
SY LI C +G
Sbjct: 376 SYNTLIYGYCRLG 388
Score = 86.3 bits (212), Expect = 2e-15
Identities = 44/133 (33%), Positives = 74/133 (55%)
Frame = +1
Query: 4 MLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHA 183
++ +M+ GL Y +I+ +F G L EA + +EM+ +G SP+V TY I+G
Sbjct: 291 LIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLC 350
Query: 184 VKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKY 363
GR++ A + S+M +LP+V++YN +I G C + + +A+ LFDE+ L P
Sbjct: 351 KLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIV 410
Query: 364 SYTLLINENCNVG 402
+Y L++ C G
Sbjct: 411 TYNTLLDGLCRQG 423
Score = 75.1 bits (183), Expect = 6e-12
Identities = 44/133 (33%), Positives = 65/133 (48%)
Frame = +1
Query: 4 MLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHA 183
+ KM+ L PD I+ + +A +V+ M G+ P++VTY L+ +
Sbjct: 186 VFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYC 245
Query: 184 VKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKY 363
G++ SEMQ +G PN +TYN +INGL + EQA L EM + GL + Y
Sbjct: 246 KGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAY 305
Query: 364 SYTLLINENCNVG 402
+Y LI N G
Sbjct: 306 TYNPLIYGYFNKG 318
Score = 74.7 bits (182), Expect = 7e-12
Identities = 41/130 (31%), Positives = 69/130 (53%)
Frame = +1
Query: 13 KMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHAVKG 192
+M+ +GL D Y + I G A + +EML++G P ++ Y V++ G G
Sbjct: 469 EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 528
Query: 193 RLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKYSYT 372
L A + +M GV+P+ +TY ++I+ E R+ + E+F EM KGL P+ +YT
Sbjct: 529 NLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYT 588
Query: 373 LLINENCNVG 402
+LI+ + G
Sbjct: 589 VLIHGHAGKG 598
Score = 66.2 bits (160), Expect = 3e-09
Identities = 30/108 (27%), Positives = 58/108 (53%)
Frame = +1
Query: 61 IIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHAVKGRLALAFKYFSEMQEKG 240
+I + +++ VFD+M+ LSP V ++ K ++ A + + M E G
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229
Query: 241 VLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKYSYTLLIN 384
+ P ++TYN +++ C+ +++Q +L EM+ +G PN +Y +LIN
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLIN 277
Score = 55.5 bits (132), Expect = 5e-06
Identities = 29/112 (25%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Frame = +1
Query: 1 LMLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGH 180
+ +M G++P+ + Y S+I+ ++ +A F EM+ +G+ P+ +YT+LI+ +
Sbjct: 605 IYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINEN 664
Query: 181 AVKGRLALAFKYFSEMQEKGVLPNVITYNAMINGL---CEMRRIEQAYELFD 327
G A + +M ++GV P+ T++A++ L C+++ + Q L D
Sbjct: 665 CNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLLD 716
>ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 188 bits (478), Expect = 3e-46
Identities = 87/133 (65%), Positives = 113/133 (84%)
Frame = +1
Query: 4 MLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHA 183
+++KM+ +GLVPDH+ YTSIIH H + G L++AR VF EMLS+G+ PSVVTYTVLIH +A
Sbjct: 492 LVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYA 551
Query: 184 VKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKY 363
V+GRL LA +F EM EKGV PNVITYNA+INGLC++R+++QAY+ F EM+ KG+ PNKY
Sbjct: 552 VRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKY 611
Query: 364 SYTLLINENCNVG 402
+YT+LINENCN+G
Sbjct: 612 TYTILINENCNLG 624
Score = 97.8 bits (242), Expect = 8e-19
Identities = 45/131 (34%), Positives = 86/131 (65%)
Frame = +1
Query: 10 QKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHAVK 189
++M++ G VP + Y +I++ G++ +AR++ D M+++ L P +V+Y LI+G+
Sbjct: 284 EEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRL 343
Query: 190 GRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKYSY 369
G + AF F+E++ +G++P+V+TYN +I+GLC M ++ A L DEM + G P+ +++
Sbjct: 344 GNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTF 403
Query: 370 TLLINENCNVG 402
T+L+ C +G
Sbjct: 404 TILVRGFCKLG 414
Score = 89.4 bits (220), Expect = 3e-16
Identities = 47/127 (37%), Positives = 75/127 (59%)
Frame = +1
Query: 1 LMLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGH 180
L +QKM G +P+ + Y +++ +G+L++A+++ EML GL S TY LI G+
Sbjct: 214 LQMQKM---GCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGY 270
Query: 181 AVKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNK 360
KG+L A + EM +G +P ++TYN ++ GLC+ R+ A +L D M K L+P+
Sbjct: 271 CEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDL 330
Query: 361 YSYTLLI 381
SY LI
Sbjct: 331 VSYNTLI 337
Score = 88.6 bits (218), Expect = 5e-16
Identities = 46/133 (34%), Positives = 79/133 (59%)
Frame = +1
Query: 4 MLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHA 183
++Q+M+ GL Y +I + GQL EA ++ +EMLS+G P++VTY +++G
Sbjct: 247 LIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLC 306
Query: 184 VKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKY 363
GR++ A K M K ++P++++YN +I G + I +A+ LF E+ +GLVP+
Sbjct: 307 KWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVV 366
Query: 364 SYTLLINENCNVG 402
+Y LI+ C +G
Sbjct: 367 TYNTLIDGLCRMG 379
Score = 87.8 bits (216), Expect = 8e-16
Identities = 48/129 (37%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Frame = +1
Query: 4 MLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHA 183
+L MV L+PD + Y ++I+ + G + EA +F E+ +GL PSVVTY LI G
Sbjct: 317 LLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLC 376
Query: 184 VKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKY 363
G L +A + EM + G P+V T+ ++ G C++ + A ELFDEM +GL P+++
Sbjct: 377 RMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRF 436
Query: 364 SY-TLLINE 387
+Y T ++ E
Sbjct: 437 AYITRIVGE 445
Score = 85.9 bits (211), Expect = 3e-15
Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 1/135 (0%)
Frame = +1
Query: 1 LMLQKMVADGLVPDHMPYTSIIHT-HFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHG 177
L+ KMV+ G++PD ++ + + AR+V++ M+ G+ P+VVTY ++
Sbjct: 140 LVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDS 199
Query: 178 HAVKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPN 357
+G++ A + +MQ+ G LPN +TYN ++NGL +EQA EL EM GL +
Sbjct: 200 FCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVS 259
Query: 358 KYSYTLLINENCNVG 402
Y+Y LI C G
Sbjct: 260 AYTYDPLIRGYCEKG 274
Score = 79.7 bits (195), Expect = 2e-13
Identities = 45/130 (34%), Positives = 71/130 (54%)
Frame = +1
Query: 13 KMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHAVKG 192
+M+ G PD +T ++ G L A+++FDEML++GL P Y I G G
Sbjct: 390 EMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLG 449
Query: 193 RLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKYSYT 372
+ AF EM +G P++ITYN I+GL ++ +++A EL +M GLVP+ +YT
Sbjct: 450 DPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYT 509
Query: 373 LLINENCNVG 402
+I+ + G
Sbjct: 510 SIIHAHLMAG 519
Score = 73.2 bits (178), Expect = 2e-11
Identities = 40/129 (31%), Positives = 69/129 (53%)
Frame = +1
Query: 16 MVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHAVKGR 195
MV G+ P + Y +++ + G+++EA Q+ +M G P+ VTY VL++G + G
Sbjct: 181 MVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGE 240
Query: 196 LALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKYSYTL 375
L A + EM G+ + TY+ +I G CE ++++A L +EM +G VP +Y
Sbjct: 241 LEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNT 300
Query: 376 LINENCNVG 402
++ C G
Sbjct: 301 IMYGLCKWG 309
>ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 188 bits (477), Expect = 5e-46
Identities = 88/133 (66%), Positives = 113/133 (84%)
Frame = +1
Query: 4 MLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHA 183
+L+ MV+DGL+PDH+ YTSII+ NG L++AR+VF+EMLS+G++PSVVTYTVLIH HA
Sbjct: 517 LLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHA 576
Query: 184 VKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKY 363
K L LAF YFS+M EK V NVITYNA+INGLC RR+++AY+ FDEMEEKG++PNK+
Sbjct: 577 AKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKF 636
Query: 364 SYTLLINENCNVG 402
SYT+LINE+CN+G
Sbjct: 637 SYTILINESCNMG 649
Score = 95.9 bits (237), Expect = 3e-18
Identities = 50/134 (37%), Positives = 75/134 (55%)
Frame = +1
Query: 1 LMLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGH 180
L+ KM+ +GL+PD I+ L +A+ V+ M G+ P+VVTY ++ +
Sbjct: 166 LVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSY 225
Query: 181 AVKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNK 360
+GR+ A + SEMQE+G PN +TYN ++NGL + +EQA L +EM GL +
Sbjct: 226 CKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSA 285
Query: 361 YSYTLLINENCNVG 402
Y+Y LIN C G
Sbjct: 286 YTYNPLINGFCQKG 299
Score = 87.8 bits (216), Expect = 8e-16
Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Frame = +1
Query: 1 LMLQKMVAD-GLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHG 177
L L+K + D GL PD YT +++ F G + AR F+EMLS+GL P Y I G
Sbjct: 410 LRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVG 469
Query: 178 HAVKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPN 357
++AF EM G P+VITYN ++ LC+ E+A +L + M GL+P+
Sbjct: 470 EMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPD 529
Query: 358 KYSYTLLIN 384
+YT +IN
Sbjct: 530 HVTYTSIIN 538
Score = 84.7 bits (208), Expect = 7e-15
Identities = 41/127 (32%), Positives = 71/127 (55%)
Frame = +1
Query: 1 LMLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGH 180
L M+ PD + + S+++ + G + EA +FDE+ + L P+V+TY LIHG
Sbjct: 341 LRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400
Query: 181 AVKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNK 360
+ G L A + EM ++G+ P++ TY ++NG ++ + A F+EM KGL P++
Sbjct: 401 CMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDR 460
Query: 361 YSYTLLI 381
++Y I
Sbjct: 461 FAYNTRI 467
Score = 77.8 bits (190), Expect = 9e-13
Identities = 39/127 (30%), Positives = 74/127 (58%)
Frame = +1
Query: 4 MLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHA 183
++++MV P Y ++++ Q+ R F +ML +P +V++ L++G+
Sbjct: 307 LVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYC 366
Query: 184 VKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKY 363
G ++ AF F E++ + ++P VITYN +I+GLC ++ A L EM ++GL P+ +
Sbjct: 367 RTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIF 426
Query: 364 SYTLLIN 384
+YT+L+N
Sbjct: 427 TYTILVN 433
Score = 73.9 bits (180), Expect = 1e-11
Identities = 39/133 (29%), Positives = 67/133 (50%)
Frame = +1
Query: 4 MLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHA 183
+L +M G P+ + Y +++ G+L++A+ + +EML+ GL+ S TY LI+G
Sbjct: 237 LLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFC 296
Query: 184 VKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKY 363
KG AF EM + P + TYN ++ GLC+ ++ F +M + P+
Sbjct: 297 QKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIV 356
Query: 364 SYTLLINENCNVG 402
S+ L+ C G
Sbjct: 357 SFNSLLYGYCRTG 369
Score = 72.8 bits (177), Expect = 3e-11
Identities = 37/122 (30%), Positives = 65/122 (53%)
Frame = +1
Query: 28 GLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHAVKGRLALA 207
G+ P + Y +++ ++ G++ +A ++ EM +G P+ VTY VL++G + KG L A
Sbjct: 210 GIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQA 269
Query: 208 FKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKYSYTLLINE 387
EM G+ + TYN +ING C+ +A++L +EM + P +Y L+
Sbjct: 270 KGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYG 329
Query: 388 NC 393
C
Sbjct: 330 LC 331
>ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 188 bits (477), Expect = 5e-46
Identities = 88/133 (66%), Positives = 113/133 (84%)
Frame = +1
Query: 4 MLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHA 183
+L+ MV+DGL+PDH+ YTSII+ NG L++AR+VF+EMLS+G++PSVVTYTVLIH HA
Sbjct: 517 LLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHA 576
Query: 184 VKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKY 363
K L LAF YFS+M EK V NVITYNA+INGLC RR+++AY+ FDEMEEKG++PNK+
Sbjct: 577 AKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKF 636
Query: 364 SYTLLINENCNVG 402
SYT+LINE+CN+G
Sbjct: 637 SYTILINESCNMG 649
Score = 95.9 bits (237), Expect = 3e-18
Identities = 50/134 (37%), Positives = 75/134 (55%)
Frame = +1
Query: 1 LMLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGH 180
L+ KM+ +GL+PD I+ L +A+ V+ M G+ P+VVTY ++ +
Sbjct: 166 LVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSY 225
Query: 181 AVKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNK 360
+GR+ A + SEMQE+G PN +TYN ++NGL + +EQA L +EM GL +
Sbjct: 226 CKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSA 285
Query: 361 YSYTLLINENCNVG 402
Y+Y LIN C G
Sbjct: 286 YTYNPLINGFCQKG 299
Score = 87.8 bits (216), Expect = 8e-16
Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Frame = +1
Query: 1 LMLQKMVAD-GLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHG 177
L L+K + D GL PD YT +++ F G + AR F+EMLS+GL P Y I G
Sbjct: 410 LRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVG 469
Query: 178 HAVKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPN 357
++AF EM G P+VITYN ++ LC+ E+A +L + M GL+P+
Sbjct: 470 EMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPD 529
Query: 358 KYSYTLLIN 384
+YT +IN
Sbjct: 530 HVTYTSIIN 538
Score = 84.7 bits (208), Expect = 7e-15
Identities = 41/127 (32%), Positives = 71/127 (55%)
Frame = +1
Query: 1 LMLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGH 180
L M+ PD + + S+++ + G + EA +FDE+ + L P+V+TY LIHG
Sbjct: 341 LRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400
Query: 181 AVKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNK 360
+ G L A + EM ++G+ P++ TY ++NG ++ + A F+EM KGL P++
Sbjct: 401 CMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDR 460
Query: 361 YSYTLLI 381
++Y I
Sbjct: 461 FAYNTRI 467
Score = 77.8 bits (190), Expect = 9e-13
Identities = 39/127 (30%), Positives = 74/127 (58%)
Frame = +1
Query: 4 MLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHA 183
++++MV P Y ++++ Q+ R F +ML +P +V++ L++G+
Sbjct: 307 LVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYC 366
Query: 184 VKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKY 363
G ++ AF F E++ + ++P VITYN +I+GLC ++ A L EM ++GL P+ +
Sbjct: 367 RTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIF 426
Query: 364 SYTLLIN 384
+YT+L+N
Sbjct: 427 TYTILVN 433
Score = 73.9 bits (180), Expect = 1e-11
Identities = 39/133 (29%), Positives = 67/133 (50%)
Frame = +1
Query: 4 MLQKMVADGLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHA 183
+L +M G P+ + Y +++ G+L++A+ + +EML+ GL+ S TY LI+G
Sbjct: 237 LLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFC 296
Query: 184 VKGRLALAFKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKY 363
KG AF EM + P + TYN ++ GLC+ ++ F +M + P+
Sbjct: 297 QKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIV 356
Query: 364 SYTLLINENCNVG 402
S+ L+ C G
Sbjct: 357 SFNSLLYGYCRTG 369
Score = 72.8 bits (177), Expect = 3e-11
Identities = 37/122 (30%), Positives = 65/122 (53%)
Frame = +1
Query: 28 GLVPDHMPYTSIIHTHFVNGQLKEARQVFDEMLSQGLSPSVVTYTVLIHGHAVKGRLALA 207
G+ P + Y +++ ++ G++ +A ++ EM +G P+ VTY VL++G + KG L A
Sbjct: 210 GIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQA 269
Query: 208 FKYFSEMQEKGVLPNVITYNAMINGLCEMRRIEQAYELFDEMEEKGLVPNKYSYTLLINE 387
EM G+ + TYN +ING C+ +A++L +EM + P +Y L+
Sbjct: 270 KGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYG 329
Query: 388 NC 393
C
Sbjct: 330 LC 331