BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040475
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containi...   137   7e-31
emb|CBI28334.3| unnamed protein product [Vitis vinifera]              137   7e-31
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...   129   3e-28
ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27
dbj|BAD54682.1| pentatricopeptide (PPR) repeat-containing protei...   124   1e-26

>ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 616

 Score =  137 bits (346), Expect = 7e-31
 Identities = 61/79 (77%), Positives = 69/79 (87%)
 Frame = -1

Query: 352 EEGKEILLSHHSEKMALAFGLISSNKGVPIRIVKNLRVCCDCHSFIKLVSEVYNHQIIVR 173
           +EGKE LL+ HSEKMA+AFGLI  NK  PI IVKNLRVCCDCH F+KLVS+VYN QII+R
Sbjct: 538 DEGKESLLNLHSEKMAIAFGLIHINKSAPIHIVKNLRVCCDCHCFMKLVSKVYNRQIIMR 597

Query: 172 DQNRFHHFKNGSCSCNDYW 116
           DQNRFHHF+NG CSCN+YW
Sbjct: 598 DQNRFHHFENGCCSCNEYW 616


>emb|CBI28334.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score =  137 bits (346), Expect = 7e-31
 Identities = 61/79 (77%), Positives = 69/79 (87%)
 Frame = -1

Query: 352 EEGKEILLSHHSEKMALAFGLISSNKGVPIRIVKNLRVCCDCHSFIKLVSEVYNHQIIVR 173
           +EGKE LL+ HSEKMA+AFGLI  NK  PI IVKNLRVCCDCH F+KLVS+VYN QII+R
Sbjct: 526 DEGKESLLNLHSEKMAIAFGLIHINKSAPIHIVKNLRVCCDCHCFMKLVSKVYNRQIIMR 585

Query: 172 DQNRFHHFKNGSCSCNDYW 116
           DQNRFHHF+NG CSCN+YW
Sbjct: 586 DQNRFHHFENGCCSCNEYW 604


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449529868|ref|XP_004171920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  129 bits (323), Expect = 3e-28
 Identities = 56/79 (70%), Positives = 68/79 (86%)
 Frame = -1

Query: 352 EEGKEILLSHHSEKMALAFGLISSNKGVPIRIVKNLRVCCDCHSFIKLVSEVYNHQIIVR 173
           EE KE  LSHHSEK+A+AFGLIS+  G PIRI+KNLRVC +CHS  KL+S+++N +II R
Sbjct: 656 EEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIAR 715

Query: 172 DQNRFHHFKNGSCSCNDYW 116
           D+NRFHHFK+GSCSCNDYW
Sbjct: 716 DRNRFHHFKDGSCSCNDYW 734


>ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Brachypodium distachyon]
          Length = 571

 Score =  126 bits (316), Expect = 2e-27
 Identities = 56/79 (70%), Positives = 67/79 (84%)
 Frame = -1

Query: 352 EEGKEILLSHHSEKMALAFGLISSNKGVPIRIVKNLRVCCDCHSFIKLVSEVYNHQIIVR 173
           EE KE+ +S HSEK+ALA GLIS+ +G  IRIVKNLR+C DCHS +K+VSEVY+  I+VR
Sbjct: 493 EEDKEVCISQHSEKLALALGLISTRRGAVIRIVKNLRICEDCHSVMKIVSEVYDRVIVVR 552

Query: 172 DQNRFHHFKNGSCSCNDYW 116
           D+NRFHHFKNGSCSC DYW
Sbjct: 553 DRNRFHHFKNGSCSCLDYW 571


>dbj|BAD54682.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 381

 Score =  124 bits (310), Expect = 1e-26
 Identities = 54/79 (68%), Positives = 68/79 (86%)
 Frame = -1

Query: 352 EEGKEILLSHHSEKMALAFGLISSNKGVPIRIVKNLRVCCDCHSFIKLVSEVYNHQIIVR 173
           EE KE+ +S HSEK+A+AFGLI++ +G  IRIVKNLR+C DCHS +K+VSEVY+  I+VR
Sbjct: 303 EEDKEVCISQHSEKLAVAFGLINTRRGAVIRIVKNLRICEDCHSVMKVVSEVYDRVIVVR 362

Query: 172 DQNRFHHFKNGSCSCNDYW 116
           D+NRFHHFK+GSCSC DYW
Sbjct: 363 DRNRFHHFKSGSCSCLDYW 381