BLASTX nr result

ID: Coptis23_contig00040470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040470
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150272.1| PREDICTED: agamous-like MADS-box protein AGL...    85   7e-15
ref|XP_002522084.1| mads box protein, putative [Ricinus communis...    79   4e-13
ref|XP_002522085.1| mads box protein, putative [Ricinus communis...    79   5e-13
ref|XP_002530713.1| mads box protein, putative [Ricinus communis...    79   5e-13
ref|XP_002313198.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13

>ref|XP_004150272.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Cucumis
           sativus] gi|449484412|ref|XP_004156875.1| PREDICTED:
           agamous-like MADS-box protein AGL62-like [Cucumis
           sativus]
          Length = 228

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 40/78 (51%), Positives = 56/78 (71%)
 Frame = +3

Query: 3   ANVRELNRRYTEALDQLEVEKKKSENFQEQKKASQNHPWLETPVENLGLHALEQLQASLE 182
           ANVRELN + T+ L+QLE+E+K+ E   + +KASQ   W E P+E + +H LEQL+ASL+
Sbjct: 94  ANVRELNAQLTQVLNQLEMERKRGEELNKLRKASQAQCWWELPIEEMEMHQLEQLKASLD 153

Query: 183 DLKKKVANRADELLINAS 236
           +LKK V  +AD +LI  S
Sbjct: 154 ELKKNVTQQADRILIQTS 171


>ref|XP_002522084.1| mads box protein, putative [Ricinus communis]
           gi|223538683|gb|EEF40284.1| mads box protein, putative
           [Ricinus communis]
          Length = 226

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/77 (49%), Positives = 54/77 (70%)
 Frame = +3

Query: 3   ANVRELNRRYTEALDQLEVEKKKSENFQEQKKASQNHPWLETPVENLGLHALEQLQASLE 182
           ANV ELN + T  L+Q+E EKKK E   + +K+SQN  W E P++ LG+H LEQL+ +LE
Sbjct: 116 ANVCELNMQLTHTLNQMEDEKKKGELLDQIRKSSQNMCWWEAPIDELGMHELEQLRFALE 175

Query: 183 DLKKKVANRADELLINA 233
           +LKK V  +  ++LIN+
Sbjct: 176 ELKKNVTKQISKILINS 192


>ref|XP_002522085.1| mads box protein, putative [Ricinus communis]
           gi|223538684|gb|EEF40285.1| mads box protein, putative
           [Ricinus communis]
          Length = 217

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/75 (50%), Positives = 53/75 (70%)
 Frame = +3

Query: 3   ANVRELNRRYTEALDQLEVEKKKSENFQEQKKASQNHPWLETPVENLGLHALEQLQASLE 182
           A+VRELN + T+ L QLE+E+K+ E   + +K  QN  W E P+++L +  LEQL+ SLE
Sbjct: 95  ASVRELNAQLTQVLTQLEMERKRGEELNQMRKTGQNRCWWEAPIDDLTMPQLEQLRMSLE 154

Query: 183 DLKKKVANRADELLI 227
            LKK VA +AD+LLI
Sbjct: 155 QLKKNVAMQADKLLI 169


>ref|XP_002530713.1| mads box protein, putative [Ricinus communis]
           gi|223529727|gb|EEF31667.1| mads box protein, putative
           [Ricinus communis]
          Length = 183

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/74 (54%), Positives = 50/74 (67%)
 Frame = +3

Query: 3   ANVRELNRRYTEALDQLEVEKKKSENFQEQKKASQNHPWLETPVENLGLHALEQLQASLE 182
           ANVRELN +   AL+QLE EKK+ E     +K+SQ+  W E PV+ LGL  LEQL+ +LE
Sbjct: 94  ANVRELNVKLIHALNQLEAEKKRGEALNRMRKSSQSMCWWEAPVDELGLQELEQLRYALE 153

Query: 183 DLKKKVANRADELL 224
           DLKK VA   D +L
Sbjct: 154 DLKKNVAKEIDRVL 167


>ref|XP_002313198.1| predicted protein [Populus trichocarpa] gi|222849606|gb|EEE87153.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/78 (47%), Positives = 56/78 (71%)
 Frame = +3

Query: 3   ANVRELNRRYTEALDQLEVEKKKSENFQEQKKASQNHPWLETPVENLGLHALEQLQASLE 182
           ANVRE N + T+ L+QLE EK+ SE   + +K+S++  W E PVE LGL  LEQL+ +LE
Sbjct: 98  ANVREHNMQLTQILNQLEAEKRHSETLNQMRKSSRSQCWWEAPVEELGLQELEQLRDALE 157

Query: 183 DLKKKVANRADELLINAS 236
           +LKK++  + +++LI +S
Sbjct: 158 ELKKRLTKQTNKILIESS 175


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