BLASTX nr result

ID: Coptis23_contig00040468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040468
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522549.1| conserved hypothetical protein [Ricinus comm...   140   1e-31
ref|XP_002274946.1| PREDICTED: uncharacterized protein LOC100253...   137   7e-31
emb|CAN64952.1| hypothetical protein VITISV_042281 [Vitis vinifera]   135   3e-30
ref|XP_002305086.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29
emb|CBI30664.3| unnamed protein product [Vitis vinifera]              131   6e-29

>ref|XP_002522549.1| conserved hypothetical protein [Ricinus communis]
           gi|223538240|gb|EEF39849.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 551

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/83 (83%), Positives = 74/83 (89%)
 Frame = +1

Query: 1   LALTLCRSEALLRVVFWLAVNVLGWSWIPLPLKTATTSFLQCLGGIHSGCGVSSIIWLVY 180
           LALTLCRSEA LRVVFWLAV V G SW+PLP+KTATTS LQ LGGIHSGCGVSSI WL+Y
Sbjct: 177 LALTLCRSEAFLRVVFWLAVKVFGRSWMPLPIKTATTSLLQSLGGIHSGCGVSSIAWLIY 236

Query: 181 SLVLTLKDRDNTSLLIIGVASTI 249
           +LVLTLKDR+NTS  IIGVASTI
Sbjct: 237 ALVLTLKDRENTSSAIIGVASTI 259


>ref|XP_002274946.1| PREDICTED: uncharacterized protein LOC100253275 [Vitis vinifera]
          Length = 503

 Score =  137 bits (346), Expect = 7e-31
 Identities = 69/83 (83%), Positives = 74/83 (89%)
 Frame = +1

Query: 1   LALTLCRSEALLRVVFWLAVNVLGWSWIPLPLKTATTSFLQCLGGIHSGCGVSSIIWLVY 180
           LALTLCRSEA LRVVFWLAV VLG SW+PL LKTATTS LQ LGGIHSGCGVSS+ WLVY
Sbjct: 178 LALTLCRSEAFLRVVFWLAVKVLGQSWVPLGLKTATTSLLQSLGGIHSGCGVSSVAWLVY 237

Query: 181 SLVLTLKDRDNTSLLIIGVASTI 249
           +LVLTL+DR+NTS  IIGVASTI
Sbjct: 238 ALVLTLQDRENTSPEIIGVASTI 260


>emb|CAN64952.1| hypothetical protein VITISV_042281 [Vitis vinifera]
          Length = 552

 Score =  135 bits (340), Expect = 3e-30
 Identities = 68/83 (81%), Positives = 73/83 (87%)
 Frame = +1

Query: 1   LALTLCRSEALLRVVFWLAVNVLGWSWIPLPLKTATTSFLQCLGGIHSGCGVSSIIWLVY 180
           LALTLCRSEA LRVVFWLAV VLG SW+PL LKTA TS LQ LGGIHSGCGVSS+ WLVY
Sbjct: 178 LALTLCRSEAFLRVVFWLAVKVLGQSWVPLGLKTAXTSLLQSLGGIHSGCGVSSVAWLVY 237

Query: 181 SLVLTLKDRDNTSLLIIGVASTI 249
           +LVLTL+DR+NTS  IIGVASTI
Sbjct: 238 ALVLTLQDRENTSPEIIGVASTI 260


>ref|XP_002305086.1| predicted protein [Populus trichocarpa] gi|222848050|gb|EEE85597.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score =  132 bits (333), Expect = 2e-29
 Identities = 63/83 (75%), Positives = 73/83 (87%)
 Frame = +1

Query: 1   LALTLCRSEALLRVVFWLAVNVLGWSWIPLPLKTATTSFLQCLGGIHSGCGVSSIIWLVY 180
           LALTLCRSEA LRVVFW+AV V+G SWIPLP+KTATTS LQ LGGIHS CG+SS+ WL+Y
Sbjct: 173 LALTLCRSEAFLRVVFWIAVKVIGRSWIPLPIKTATTSLLQSLGGIHSSCGISSVAWLIY 232

Query: 181 SLVLTLKDRDNTSLLIIGVASTI 249
           +LVLTLK+R+NTS  I+GVAS I
Sbjct: 233 ALVLTLKNRENTSPEIVGVASII 255


>emb|CBI30664.3| unnamed protein product [Vitis vinifera]
          Length = 530

 Score =  131 bits (329), Expect = 6e-29
 Identities = 65/82 (79%), Positives = 71/82 (86%)
 Frame = +1

Query: 1   LALTLCRSEALLRVVFWLAVNVLGWSWIPLPLKTATTSFLQCLGGIHSGCGVSSIIWLVY 180
           LALTLCRSEA LRVVFWLAV VLG SW+PL LKTATTS LQ LGGIHSGCGVSS+ WLVY
Sbjct: 222 LALTLCRSEAFLRVVFWLAVKVLGQSWVPLGLKTATTSLLQSLGGIHSGCGVSSVAWLVY 281

Query: 181 SLVLTLKDRDNTSLLIIGVAST 246
           +LVLTL+DR+NTS  II  A+T
Sbjct: 282 ALVLTLEDRENTSPEIISTATT 303


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