BLASTX nr result

ID: Coptis23_contig00040449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040449
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869047.1| hypothetical protein ARALYDRAFT_328155 [Arab...    96   3e-18
ref|NP_680769.4| S-adenosyl-L-methionine-dependent methyltransfe...    94   2e-17
ref|XP_002529657.1| conserved hypothetical protein [Ricinus comm...    93   2e-17
ref|XP_002265595.1| PREDICTED: calmodulin-lysine N-methyltransfe...    91   7e-17
emb|CAN62439.1| hypothetical protein VITISV_044009 [Vitis vinifera]    91   7e-17

>ref|XP_002869047.1| hypothetical protein ARALYDRAFT_328155 [Arabidopsis lyrata subsp.
           lyrata] gi|297314883|gb|EFH45306.1| hypothetical protein
           ARALYDRAFT_328155 [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 6/84 (7%)
 Frame = +3

Query: 3   GFNLIPCRIIS------KCEDVCVSYTLPLEGAPTLVLNQRLDNTTTSVNLINDFHICNQ 164
           GFNLIPC ++       K  + C+ YT P+ G+P L L QR+DN +     +NDF I N+
Sbjct: 46  GFNLIPCHVVDSSPQSDKSREACLCYTFPITGSPKLYLTQRVDNCSD----LNDFEISNR 101

Query: 165 FAIDNTGLVCHWPSEDVLAYFCLS 236
           + IDNTGLVC WPSE+VLAYFC+S
Sbjct: 102 YNIDNTGLVCQWPSEEVLAYFCMS 125


>ref|NP_680769.4| S-adenosyl-L-methionine-dependent methyltransferase
           domain-containing protein [Arabidopsis thaliana]
           gi|332661199|gb|AEE86599.1|
           S-adenosyl-L-methionine-dependent methyltransferase
           domain-containing protein [Arabidopsis thaliana]
          Length = 304

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 45/84 (53%), Positives = 57/84 (67%), Gaps = 6/84 (7%)
 Frame = +3

Query: 3   GFNLIPCRIIS------KCEDVCVSYTLPLEGAPTLVLNQRLDNTTTSVNLINDFHICNQ 164
           GFNLIPC+++       K  +  V YTLP+ G+P L L QR+DN +     +NDF I N+
Sbjct: 42  GFNLIPCQVVDSSPQSDKSREASVCYTLPITGSPKLYLTQRVDNCSD----LNDFEISNR 97

Query: 165 FAIDNTGLVCHWPSEDVLAYFCLS 236
           + IDNTGLVC WPSE+VLAYFC S
Sbjct: 98  YNIDNTGLVCQWPSEEVLAYFCKS 121


>ref|XP_002529657.1| conserved hypothetical protein [Ricinus communis]
           gi|223530883|gb|EEF32744.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 176

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/80 (55%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
 Frame = +3

Query: 3   GFNLIPCRIISK---CEDVCVSYTLPLEGAPTLVLNQRLDNTTTSVNLINDFHICNQFAI 173
           GFNLIP +++ K     D  + YTLP+ G+P L L QR+D+       ++DF I N++ I
Sbjct: 47  GFNLIPSQLVDKDSNSRDATICYTLPINGSPKLFLTQRMDDGAD----LSDFEISNRYNI 102

Query: 174 DNTGLVCHWPSEDVLAYFCL 233
           DNTGLVCHWPSEDVLAYFCL
Sbjct: 103 DNTGLVCHWPSEDVLAYFCL 122


>ref|XP_002265595.1| PREDICTED: calmodulin-lysine N-methyltransferase [Vitis vinifera]
           gi|297735003|emb|CBI17365.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 45/88 (51%), Positives = 56/88 (63%), Gaps = 10/88 (11%)
 Frame = +3

Query: 3   GFNLIPCRIIS----------KCEDVCVSYTLPLEGAPTLVLNQRLDNTTTSVNLINDFH 152
           GFNLIP  ++           +  D  + YTLP+E A  L L QR+D+       +NDF 
Sbjct: 49  GFNLIPHHLMDGHDEHFSGSDRSRDARICYTLPVESASKLYLTQRVDDRAN----LNDFE 104

Query: 153 ICNQFAIDNTGLVCHWPSEDVLAYFCLS 236
           ICN++ IDNTGLVCHWPSED+LAYFCLS
Sbjct: 105 ICNRYDIDNTGLVCHWPSEDILAYFCLS 132


>emb|CAN62439.1| hypothetical protein VITISV_044009 [Vitis vinifera]
          Length = 1290

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 45/88 (51%), Positives = 56/88 (63%), Gaps = 10/88 (11%)
 Frame = +3

Query: 3   GFNLIPCRIIS----------KCEDVCVSYTLPLEGAPTLVLNQRLDNTTTSVNLINDFH 152
           GFNLIP  ++           +  D  + YTLP+E A  L L QR+D+       +NDF 
Sbjct: 75  GFNLIPHHLMDGHDEHFSGSDRSRDARICYTLPVESASKLYLTQRVDDRAN----LNDFE 130

Query: 153 ICNQFAIDNTGLVCHWPSEDVLAYFCLS 236
           ICN++ IDNTGLVCHWPSED+LAYFCLS
Sbjct: 131 ICNRYDIDNTGLVCHWPSEDILAYFCLS 158


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