BLASTX nr result

ID: Coptis23_contig00040448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040448
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311390.1| predicted protein [Populus trichocarpa] gi|2...   119   1e-25
gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]        111   7e-23
ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea ma...   111   7e-23
ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [S...   108   3e-22
emb|CBI38781.3| unnamed protein product [Vitis vinifera]              108   5e-22

>ref|XP_002311390.1| predicted protein [Populus trichocarpa] gi|222851210|gb|EEE88757.1|
           predicted protein [Populus trichocarpa]
          Length = 594

 Score =  119 bits (298), Expect(2) = 1e-25
 Identities = 55/88 (62%), Positives = 76/88 (86%)
 Frame = +1

Query: 28  LSTALVDMYSKCGRVEVALDVFWRAPDKKVFLWNSILGGLAMHSRGKEALMLFSEMLDGQ 207
           LSTAL+DMYSKCGR+++A  VF    DKKVF+W+S++GGLAMHS G++A+ LF++M++  
Sbjct: 336 LSTALIDMYSKCGRIDMAWKVFQETGDKKVFVWSSMIGGLAMHSFGEKAIELFAKMIECG 395

Query: 208 IKPNEITFICVLAACSHSGLVDDGLRIF 291
           I+P+EIT+I +LAAC+HSGLVD GL+IF
Sbjct: 396 IEPSEITYINILAACTHSGLVDVGLQIF 423



 Score = 22.3 bits (46), Expect(2) = 1e-25
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +2

Query: 2   KHGIEVDAH 28
           KHGI+VDAH
Sbjct: 327 KHGIKVDAH 335


>gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
          Length = 537

 Score =  111 bits (277), Expect = 7e-23
 Identities = 49/89 (55%), Positives = 64/89 (71%)
 Frame = +1

Query: 25  SLSTALVDMYSKCGRVEVALDVFWRAPDKKVFLWNSILGGLAMHSRGKEALMLFSEMLDG 204
           +L  AL+DMY+KCG +  AL+VFW   DK V  WNSI+GGLA+H    E++ +F +ML G
Sbjct: 316 ALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATESIAVFRKMLQG 375

Query: 205 QIKPNEITFICVLAACSHSGLVDDGLRIF 291
            +KP+EITF+ VLAACSH G+VD G   F
Sbjct: 376 NVKPDEITFVAVLAACSHGGMVDKGHEYF 404



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/83 (33%), Positives = 49/83 (59%)
 Frame = +1

Query: 40  LVDMYSKCGRVEVALDVFWRAPDKKVFLWNSILGGLAMHSRGKEALMLFSEMLDGQIKPN 219
           ++  Y+K G +  A ++F  APD+ V  WN+++ G       K+A+ LF +M     KP+
Sbjct: 218 MITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSRKQAMELFEQMQAMGEKPD 277

Query: 220 EITFICVLAACSHSGLVDDGLRI 288
            +T + +L+AC+ SG +D G R+
Sbjct: 278 TVTMLSLLSACADSGDLDAGRRL 300


>ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
           gi|219886289|gb|ACL53519.1| unknown [Zea mays]
          Length = 537

 Score =  111 bits (277), Expect = 7e-23
 Identities = 49/89 (55%), Positives = 64/89 (71%)
 Frame = +1

Query: 25  SLSTALVDMYSKCGRVEVALDVFWRAPDKKVFLWNSILGGLAMHSRGKEALMLFSEMLDG 204
           +L  AL+DMY+KCG +  AL+VFW   DK V  WNSI+GGLA+H    E++ +F +ML G
Sbjct: 316 ALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATESIAVFRKMLQG 375

Query: 205 QIKPNEITFICVLAACSHSGLVDDGLRIF 291
            +KP+EITF+ VLAACSH G+VD G   F
Sbjct: 376 NVKPDEITFVAVLAACSHGGMVDKGHEYF 404



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/83 (33%), Positives = 49/83 (59%)
 Frame = +1

Query: 40  LVDMYSKCGRVEVALDVFWRAPDKKVFLWNSILGGLAMHSRGKEALMLFSEMLDGQIKPN 219
           ++  Y+K G +  A ++F  APD+ V  WN+++ G       K+A+ LF +M     KP+
Sbjct: 218 MITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSRKQAMELFEQMQAMGEKPD 277

Query: 220 EITFICVLAACSHSGLVDDGLRI 288
            +T + +L+AC+ SG +D G R+
Sbjct: 278 TVTMLSLLSACADSGDLDAGRRL 300


>ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
           gi|241919651|gb|EER92795.1| hypothetical protein
           SORBIDRAFT_01g045970 [Sorghum bicolor]
          Length = 531

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/88 (55%), Positives = 62/88 (70%)
 Frame = +1

Query: 28  LSTALVDMYSKCGRVEVALDVFWRAPDKKVFLWNSILGGLAMHSRGKEALMLFSEMLDGQ 207
           L  AL+DMY+KCG +  AL+VFW   DK V  WNSI+GGLA+H    EA+ +F +ML G 
Sbjct: 316 LGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHVTEAIDVFQKMLQGN 375

Query: 208 IKPNEITFICVLAACSHSGLVDDGLRIF 291
           +KP+EITF+ VL ACSH G+VD G   F
Sbjct: 376 VKPDEITFVAVLVACSHGGMVDKGHEYF 403



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/83 (33%), Positives = 49/83 (59%)
 Frame = +1

Query: 40  LVDMYSKCGRVEVALDVFWRAPDKKVFLWNSILGGLAMHSRGKEALMLFSEMLDGQIKPN 219
           ++  Y+K G +  A ++F  APD+ V  WN+++ G       K+A+ LF +M     KP+
Sbjct: 217 MITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSHKQAMELFEQMQAMGEKPD 276

Query: 220 EITFICVLAACSHSGLVDDGLRI 288
            +T + +L+AC+ SG +D G R+
Sbjct: 277 TVTMLSLLSACADSGDMDAGRRL 299


>emb|CBI38781.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  108 bits (270), Expect = 5e-22
 Identities = 47/88 (53%), Positives = 68/88 (77%)
 Frame = +1

Query: 28  LSTALVDMYSKCGRVEVALDVFWRAPDKKVFLWNSILGGLAMHSRGKEALMLFSEMLDGQ 207
           L TALVDMY+KCG +++AL VF R   + VF WN+++GGLAMH  G++A+ LF +M   +
Sbjct: 253 LETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDK 312

Query: 208 IKPNEITFICVLAACSHSGLVDDGLRIF 291
           + P+++TFI +L ACSH+GLVD+GL +F
Sbjct: 313 LMPDDVTFIALLCACSHAGLVDEGLAMF 340


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