BLASTX nr result

ID: Coptis23_contig00040437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040437
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indi...   114   8e-24
gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo...   112   4e-23
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...   110   2e-22
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   107   1e-21
ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [S...   106   2e-21

>gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indica Group]
          Length = 1546

 Score =  114 bits (285), Expect = 8e-24
 Identities = 63/113 (55%), Positives = 80/113 (70%)
 Frame = -2

Query: 340 DHISKFRPISLCNFTYKICSKILATRLKSHLHKFISPLQGAFVKGRSIGDNIGLASEVLH 161
           D +++FRPISLCN  YK+ SK+L+ RLK  L + IS  Q AFV GR I DNI LA E +H
Sbjct: 272 DKVTQFRPISLCNVVYKVISKMLSFRLKQILPEIISDHQSAFVPGRLITDNILLAYECIH 331

Query: 160 NMKRMKKQKQGWMAVKLDMAKAFDRVE*CFVDQIMGKLGFSAK*RRLIQQCIS 2
            MKR KK ++G  AVKLDM KA+DRVE  F+++IM KLGF  +  +LI  C+S
Sbjct: 332 TMKR-KKGRKGLCAVKLDMHKAYDRVEWGFLEKIMTKLGFDQRWIKLIMACVS 383


>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
          Length = 662

 Score =  112 bits (279), Expect = 4e-23
 Identities = 58/113 (51%), Positives = 78/113 (69%)
 Frame = -2

Query: 340 DHISKFRPISLCNFTYKICSKILATRLKSHLHKFISPLQGAFVKGRSIGDNIGLASEVLH 161
           ++I   RPISLCN  YKI SK+LA RLK+ L + ISP Q AFV GR I DNI +A E+ H
Sbjct: 193 ENIKDLRPISLCNVLYKIVSKVLANRLKTILPEVISPTQSAFVPGRLISDNILVAYEMTH 252

Query: 160 NMKRMKKQKQGWMAVKLDMAKAFDRVE*CFVDQIMGKLGFSAK*RRLIQQCIS 2
            M+  K+ K G+ A+KLDM+KA+DRVE  F+  +M  LGF+A+   L+  C++
Sbjct: 253 YMRSKKRGKMGYAAIKLDMSKAYDRVEWSFLRDMMLWLGFNAEWINLVMHCVT 305


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/111 (50%), Positives = 76/111 (68%)
 Frame = -2

Query: 334 ISKFRPISLCNFTYKICSKILATRLKSHLHKFISPLQGAFVKGRSIGDNIGLASEVLHNM 155
           +   RPISLCN  YK+ SK+LA RLK  L   IS  Q AFV GR I DN+ LA E++H++
Sbjct: 82  LKDLRPISLCNVLYKLISKVLANRLKKILPNIISNSQSAFVPGRLITDNVLLAYEIVHHL 141

Query: 154 KRMKKQKQGWMAVKLDMAKAFDRVE*CFVDQIMGKLGFSAK*RRLIQQCIS 2
           K +KK   G  A+KLDM+KA+DRVE  F++ +M K+GF  K  +LI +C++
Sbjct: 142 KSIKKGAGGLAAIKLDMSKAYDRVEWSFLENMMRKMGFDEKWVQLIMKCVT 192


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  107 bits (266), Expect = 1e-21
 Identities = 57/111 (51%), Positives = 71/111 (63%)
 Frame = -2

Query: 334  ISKFRPISLCNFTYKICSKILATRLKSHLHKFISPLQGAFVKGRSIGDNIGLASEVLHNM 155
            I   RPISLCN  YK+ SK+LA RLK  L   ISP Q AFV GR I DNI +A E+ H M
Sbjct: 730  IKDLRPISLCNVCYKLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNILIADEMTHYM 789

Query: 154  KRMKKQKQGWMAVKLDMAKAFDRVE*CFVDQIMGKLGFSAK*RRLIQQCIS 2
            +  +  + G+ A KLDM+KA+DRVE  F+  +M KLGF      LI +C+S
Sbjct: 790  RNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMMLKLGFHTDWVNLIMKCVS 840


>ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [Sorghum bicolor]
           gi|241943773|gb|EES16918.1| hypothetical protein
           SORBIDRAFT_08g007680 [Sorghum bicolor]
          Length = 649

 Score =  106 bits (264), Expect = 2e-21
 Identities = 57/111 (51%), Positives = 77/111 (69%)
 Frame = -2

Query: 334 ISKFRPISLCNFTYKICSKILATRLKSHLHKFISPLQGAFVKGRSIGDNIGLASEVLHNM 155
           +++FRPISLCN  YKICSK+LA RL+  L + IS  Q AFV GR I DN+ ++ E +H +
Sbjct: 62  MTEFRPISLCNVLYKICSKVLALRLREFLDEIISEEQSAFVPGRLITDNVLISYECIHYL 121

Query: 154 KRMKKQKQGWMAVKLDMAKAFDRVE*CFVDQIMGKLGFSAK*RRLIQQCIS 2
           KR +K K G  A+KLDMAKA+D VE  ++  IM KLGF     R+I +C++
Sbjct: 122 KR-RKGKNGACAIKLDMAKAYDPVEWEYLQGIMLKLGFHEAFVRMIMKCVT 171


Top