BLASTX nr result

ID: Coptis23_contig00040433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040433
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_173934.2| P-loop containing nucleoside triphosphate hydro...   161   6e-38
ref|XP_002278585.1| PREDICTED: uncharacterized protein At1g26090...   160   1e-37
emb|CBI27076.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_002893417.1| ATP binding protein [Arabidopsis lyrata subs...   157   1e-36
gb|AFK38663.1| unknown [Medicago truncatula]                          155   4e-36

>ref|NP_173934.2| P-loop containing nucleoside triphosphate hydrolase-like protein
           [Arabidopsis thaliana]
           gi|75323193|sp|Q6DYE4.1|Y1609_ARATH RecName:
           Full=Uncharacterized protein At1g26090, chloroplastic;
           Flags: Precursor gi|49617729|gb|AAT67560.1| hypothetical
           protein At1G26090 [Arabidopsis thaliana]
           gi|67633392|gb|AAY78621.1| hypothetical protein
           At1g26090 [Arabidopsis thaliana]
           gi|332192526|gb|AEE30647.1| P-loop containing nucleoside
           triphosphate hydrolase-like protein [Arabidopsis
           thaliana]
          Length = 455

 Score =  161 bits (407), Expect = 6e-38
 Identities = 85/136 (62%), Positives = 97/136 (71%)
 Frame = +3

Query: 3   VTFLGKGGSGKTTSAVLAAQFYANAGLKTCLVTHSQDPTVEYLMGCKIGTSPTVCKSNLS 182
           VTFLGKGGSGKTT+AV AAQ YA AGL TCLV H+QDP+ E+L+G KIGTSPT+   NLS
Sbjct: 61  VTFLGKGGSGKTTAAVFAAQHYALAGLSTCLVIHNQDPSAEFLLGSKIGTSPTLINDNLS 120

Query: 183 VVRLETTKMLLGPLNQLKQADARLKLTQXXXXXXXXXXXXXXPGMDSIFAALELNQFVGF 362
           V+RLETTKMLL PL QLKQADARL +TQ              PGMDSIF+ LEL + VGF
Sbjct: 121 VIRLETTKMLLEPLKQLKQADARLNMTQGVLEGVVGEELGVLPGMDSIFSMLELERLVGF 180

Query: 363 LGMTATKRNQPQSKFD 410
               AT++N     FD
Sbjct: 181 F-RQATRKNHKGKPFD 195


>ref|XP_002278585.1| PREDICTED: uncharacterized protein At1g26090, chloroplastic-like
           [Vitis vinifera]
          Length = 441

 Score =  160 bits (404), Expect = 1e-37
 Identities = 82/136 (60%), Positives = 94/136 (69%)
 Frame = +3

Query: 3   VTFLGKGGSGKTTSAVLAAQFYANAGLKTCLVTHSQDPTVEYLMGCKIGTSPTVCKSNLS 182
           VTFLGKGGSGKTTSA+ AAQ YA  G  TCLV HSQDPT EYL+ CKIGTSP +C +NLS
Sbjct: 45  VTFLGKGGSGKTTSAIFAAQHYAMTGFNTCLVIHSQDPTAEYLLNCKIGTSPIICNNNLS 104

Query: 183 VVRLETTKMLLGPLNQLKQADARLKLTQXXXXXXXXXXXXXXPGMDSIFAALELNQFVGF 362
            VRLETTKMLL PL+ LK+ADA L +TQ              PGMDS+F  L L + VGF
Sbjct: 105 AVRLETTKMLLEPLHLLKKADAELNITQGVLEGVVGEELGVLPGMDSVFTLLALERLVGF 164

Query: 363 LGMTATKRNQPQSKFD 410
           LG    +RN  + K+D
Sbjct: 165 LG-NLGRRNLRKDKYD 179


>emb|CBI27076.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  160 bits (404), Expect = 1e-37
 Identities = 82/136 (60%), Positives = 94/136 (69%)
 Frame = +3

Query: 3   VTFLGKGGSGKTTSAVLAAQFYANAGLKTCLVTHSQDPTVEYLMGCKIGTSPTVCKSNLS 182
           VTFLGKGGSGKTTSA+ AAQ YA  G  TCLV HSQDPT EYL+ CKIGTSP +C +NLS
Sbjct: 45  VTFLGKGGSGKTTSAIFAAQHYAMTGFNTCLVIHSQDPTAEYLLNCKIGTSPIICNNNLS 104

Query: 183 VVRLETTKMLLGPLNQLKQADARLKLTQXXXXXXXXXXXXXXPGMDSIFAALELNQFVGF 362
            VRLETTKMLL PL+ LK+ADA L +TQ              PGMDS+F  L L + VGF
Sbjct: 105 AVRLETTKMLLEPLHLLKKADAELNITQGVLEGVVGEELGVLPGMDSVFTLLALERLVGF 164

Query: 363 LGMTATKRNQPQSKFD 410
           LG    +RN  + K+D
Sbjct: 165 LG-NLGRRNLRKDKYD 179


>ref|XP_002893417.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297339259|gb|EFH69676.1| ATP binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 453

 Score =  157 bits (396), Expect = 1e-36
 Identities = 82/136 (60%), Positives = 96/136 (70%)
 Frame = +3

Query: 3   VTFLGKGGSGKTTSAVLAAQFYANAGLKTCLVTHSQDPTVEYLMGCKIGTSPTVCKSNLS 182
           VTFLGKGGSGKTT+AV AAQ YA AGL TCLV H+QDP+ ++L+G KIGTSPT+   NLS
Sbjct: 59  VTFLGKGGSGKTTAAVFAAQHYALAGLSTCLVVHNQDPSADFLLGSKIGTSPTLINDNLS 118

Query: 183 VVRLETTKMLLGPLNQLKQADARLKLTQXXXXXXXXXXXXXXPGMDSIFAALELNQFVGF 362
           V+RLETTKMLL PL QLKQADARL +TQ              PGMDSIF+ LEL +  GF
Sbjct: 119 VIRLETTKMLLEPLKQLKQADARLNMTQGVLEGVVGEELGVLPGMDSIFSMLELERLAGF 178

Query: 363 LGMTATKRNQPQSKFD 410
               AT++N     F+
Sbjct: 179 F-RQATRKNHKGEPFN 193


>gb|AFK38663.1| unknown [Medicago truncatula]
          Length = 440

 Score =  155 bits (391), Expect = 4e-36
 Identities = 82/136 (60%), Positives = 94/136 (69%)
 Frame = +3

Query: 3   VTFLGKGGSGKTTSAVLAAQFYANAGLKTCLVTHSQDPTVEYLMGCKIGTSPTVCKSNLS 182
           +TFLGKGGSGKTT+A+ AAQ +A AGL TCLV HSQD T +YL+ CKIGTS   C  NLS
Sbjct: 44  LTFLGKGGSGKTTAAIFAAQHFAMAGLNTCLVIHSQDITADYLLNCKIGTSYVECSKNLS 103

Query: 183 VVRLETTKMLLGPLNQLKQADARLKLTQXXXXXXXXXXXXXXPGMDSIFAALELNQFVGF 362
            VRLETTKMLL PL  LKQADA+L +TQ              PGMDSIF+ L L + VGF
Sbjct: 104 AVRLETTKMLLEPLKLLKQADAQLNMTQGTLGGIVGEELGILPGMDSIFSVLALERLVGF 163

Query: 363 LGMTATKRNQPQSKFD 410
           LGM ++K    Q KFD
Sbjct: 164 LGMPSSK--SEQDKFD 177


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